Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0952 |
Symbol | |
ID | 4082451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 977505 |
End bp | 977852 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009313 |
Product | GntR family transcriptional regulator |
Protein accession | YP_616003 |
Protein GI | 103486442 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.091739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATC AGTCCAAACC CGTGTACCAG CGCCTGCGCG ACGTGATCGC CAACGCGATC CTCGACGGCA CCTTTCGCGA CGGCGACATG TTGCCTTCGG TGCGCAGCCT CGCCGCCGAC GAAGGCGCCA ACCCGCTCAC CGTCGCCAAG GCCTATCAGA CCTTTCAGGA CGAGGGGCTG GTCACGGTGA AGCGCGGCGT GGGCATGTTC GTCGCCGAGG GGGCGACCGA TCGGCTGCGC GACCTGATGC GCGAAGATTT CCTGACGAAT GTGTGGCCCC CGGTCGCACA GCAGATGCGC CGCATCGGCC TCGACGCGCG GACCTTGCTC GATTTGACCG AGGCCTGA
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Protein sequence | MLDQSKPVYQ RLRDVIANAI LDGTFRDGDM LPSVRSLAAD EGANPLTVAK AYQTFQDEGL VTVKRGVGMF VAEGATDRLR DLMREDFLTN VWPPVAQQMR RIGLDARTLL DLTEA
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