Gene Sala_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0952 
Symbol 
ID4082451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp977505 
End bp977852 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content66% 
IMG OID638009313 
ProductGntR family transcriptional regulator 
Protein accessionYP_616003 
Protein GI103486442 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.091739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC AGTCCAAACC CGTGTACCAG CGCCTGCGCG ACGTGATCGC CAACGCGATC 
CTCGACGGCA CCTTTCGCGA CGGCGACATG TTGCCTTCGG TGCGCAGCCT CGCCGCCGAC
GAAGGCGCCA ACCCGCTCAC CGTCGCCAAG GCCTATCAGA CCTTTCAGGA CGAGGGGCTG
GTCACGGTGA AGCGCGGCGT GGGCATGTTC GTCGCCGAGG GGGCGACCGA TCGGCTGCGC
GACCTGATGC GCGAAGATTT CCTGACGAAT GTGTGGCCCC CGGTCGCACA GCAGATGCGC
CGCATCGGCC TCGACGCGCG GACCTTGCTC GATTTGACCG AGGCCTGA
 
Protein sequence
MLDQSKPVYQ RLRDVIANAI LDGTFRDGDM LPSVRSLAAD EGANPLTVAK AYQTFQDEGL 
VTVKRGVGMF VAEGATDRLR DLMREDFLTN VWPPVAQQMR RIGLDARTLL DLTEA