Gene Sala_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0942 
Symbol 
ID4080495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp960946 
End bp961932 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content60% 
IMG OID638009303 
Productintegral membrane protein TerC 
Protein accessionYP_615993 
Protein GI103486432 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTC TGTTCGCCGA CTGGCTGGGC ACCCCGGCCT GGTTCTGGCT GGCCTTTATC 
GCCATCGTCA TCGCGCTGAC CGCCTTTGAC CTTGGCATTC TCAACAAGGA AAACAAGGAA
ATGGGGATCG GCGAGAGCCT CAAGCTCTCG GCGCTTTACA TCGGCATTGC CCTCGCGTTC
GGCGCGTGGG TCTGGAGCGC GAAGGGCGGC GAGGCCGGCC TCCAATATTA TACCGGCTTC
TTTATCGAGA AGGCGCTGTC GATCGACAAT ATCTTTGTCA TTTCGCTGAT TTTCACGACG
TTCGCGATTC CGCCGCGTTA CCAGTATCGC GCGCTGCTTT GGGGCATCGT CGCGGTGATC
GTGCTGCGCG GGATCATGAT CGCGGGCGGC GCGGCGCTGG TCAGCGAATA TGGCTGGCTG
CTTTATGTCT TCGCCGCCTT CCTCATCTTC ACCGGCGTCA AGATGCTGTT TGCAAGCGAA
AAGCCGATGG ACGTTGCGGG CAATCCGGTC GTCAAATGGC TGTCGCGCCA CATGCCGATC
ACAAACGAAC TGCACGGCGA GCGCTTCTTC GTCCGCGTGC CCGACAGCAA GACGGGCAAG
CTGGCGCTCG CGGCGACGCC GCTGTTCCTC GCGCTGGTCG TCATAAACCT CGCCGACCTG
GTGTTCGCGG TCGACAGCGT GCCGGCGATC TTTGCGATCA CCACGGACAC CTTCATCGTC
TATACGTCGA ACATCATGGC GATCCTTGGC CTTCGCGCGC TCTACTTCGC CCTGTCGGCG
ATGGTGCATC GCTTCCATTA TCTCAAATAT GCGCTTGCGC TGGTGCTTGT GTTCATCGGG
TCGAAAATCT TCGTTGCCGA TTTCATCCTC GGCAGCGACA AGTTCCCGCC GCTTGTCAGT
CTTGGCGTGA CCGTCGCGCT GATCGCGGGC GGCATCATCT GGTCGCTCGT CAAAACGCGC
GAAGAGAAGG CGGCGCTGCG CCAGTAA
 
Protein sequence
MEFLFADWLG TPAWFWLAFI AIVIALTAFD LGILNKENKE MGIGESLKLS ALYIGIALAF 
GAWVWSAKGG EAGLQYYTGF FIEKALSIDN IFVISLIFTT FAIPPRYQYR ALLWGIVAVI
VLRGIMIAGG AALVSEYGWL LYVFAAFLIF TGVKMLFASE KPMDVAGNPV VKWLSRHMPI
TNELHGERFF VRVPDSKTGK LALAATPLFL ALVVINLADL VFAVDSVPAI FAITTDTFIV
YTSNIMAILG LRALYFALSA MVHRFHYLKY ALALVLVFIG SKIFVADFIL GSDKFPPLVS
LGVTVALIAG GIIWSLVKTR EEKAALRQ