| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0869 |
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| Symbol | |
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| ID | 4082659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 875269 |
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| End bp | 876780 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009230 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_615920 |
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| Protein GI | 103486359 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.184154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAT CGTTCATCGA TGCGATGATC GCGGCGGCGG CGCGTGCGCC GCAGGCGTCG
CTGATCGTCG CATCGGACAT GCGCCCGTGT GATACCACGC TCGGTGAGGT CACGGCGGCG
GGGCGCCGCA TGGGAAGCCG GATGACCAAG GCGGGAGTTC GGCCTGGTGA TGTGGTCGGC
TGTATGCTCC CCAATTGGCG CGAATGGCTC GTCGTCGCGG TTGCCGCGGC ACAGGCTGGC
GCGGTCATGC TGCCGATCGT CACCATCTAT GGTGCAAAGG AACTGGCGTT TATCCTGCGT
CAGTCGAAGG CGCGCTGGCT TTTTACGCCC GACCATTTTC GCGGCACCGA TTATGGGCGC
CTTGTCGCCG AATGCGGCGA ATTGCCGATG CTCGAACGGC ATATCCGTGC CGGAGAGGAT
TTCGGTGCGC TGGAAAGCGA CGGGGCGATG GCGGACCCTG TACCGTCTGA TCCCGACGAA
CTCGCGCTGC TGGTATATAC GTCGGGGACC ACCGCCGATC CCAAGGGGGT GATGCACAGC
GCGCGCACTT TGCTGGCCGA GATGGCCTCG ATGCGGGAAA TGCGGCGTGA GAAGGACGAG
GATATTGTCA TCTCGCCCTG GCCTCCCGGC CATGTCGCGG GCGCGCTGTC GATGTACCGC
TTTCTTTGCC AGGGAACGCC GCTGGTGCTG ATGGATCAGT GGGACGCAGC GCTCGCCGCC
GAGCTGATCG ATCGCCACAA GCCGACCTCC TCGTCGGGAA CGCCCTTTCA CCTGTCGGGC
TTGCTCGCGG CGGCCGACGT CCATGGCCAT GACCTCTCTT CGCTCCGCCA GTATCTGGTC
GGTGCGGCGC CGGTTCCGTC CTCGCTTGTC GAGCGCTGTC AGGGGCAGGG GCTCGCCGTC
TATCACTGCT ATGGATCGAG CGAGCATCCC ACCGTGACCT CCGGCACCGT CGACGATCCG
CTCGACAAGC AGCTCCACAC CGAAGGCCGG GCGATCGCGG ATTGTGAAAT GCGCTTCGTC
GATGACGACG GCAACGATGT GCCCGCCGGT TGCGATGGCG AAATCTGCAC GCGCGGACCC
GACCTCTTCC TGGGCTATCT TGACCCCGCA TTGAACACGG ACGCCTTCCT TCCGGGGGGC
TGGTATCGTA CCGGCGACAT CGGCCGCCTC GACGACGACG GTTATCTGCT GATTACCGAT
CGCAAGAAAG ACATCATCAT CCGCGGTGGC GAGAATATCT CGTCAAAGGA AGTCGAAGCG
CTGCTGCTCG CGCATCCGGC CATCGTCGAT GCGGCGGCGG TGGCGGCGCC GGACGACCGT
ATGGGCGAAG TGGTCCGCGC CTGCGTCGTT CTGGCGCCAG AAGCGACGCT GACGATCGAC
GAATTGCGCG AACATTTCTT CGCGGCCGGC ATTGCGAAAC AAAAGACTCC CGAACGGCTG
ACCATCCTGC CCGAGCTTCC GCGCAATGCA TCGGGCAAGG TGTTGAAGCA TGAATTGCGC
CGCTGTTCCT GA
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| Protein sequence | MTASFIDAMI AAAARAPQAS LIVASDMRPC DTTLGEVTAA GRRMGSRMTK AGVRPGDVVG
CMLPNWREWL VVAVAAAQAG AVMLPIVTIY GAKELAFILR QSKARWLFTP DHFRGTDYGR
LVAECGELPM LERHIRAGED FGALESDGAM ADPVPSDPDE LALLVYTSGT TADPKGVMHS
ARTLLAEMAS MREMRREKDE DIVISPWPPG HVAGALSMYR FLCQGTPLVL MDQWDAALAA
ELIDRHKPTS SSGTPFHLSG LLAAADVHGH DLSSLRQYLV GAAPVPSSLV ERCQGQGLAV
YHCYGSSEHP TVTSGTVDDP LDKQLHTEGR AIADCEMRFV DDDGNDVPAG CDGEICTRGP
DLFLGYLDPA LNTDAFLPGG WYRTGDIGRL DDDGYLLITD RKKDIIIRGG ENISSKEVEA
LLLAHPAIVD AAAVAAPDDR MGEVVRACVV LAPEATLTID ELREHFFAAG IAKQKTPERL
TILPELPRNA SGKVLKHELR RCS
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