| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0861 |
|---|
| Symbol | |
|---|
| ID | 4079997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 869236 |
|---|
| End bp | 870300 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638009222 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_615912 |
|---|
| Protein GI | 103486351 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.622757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT TGCGCGCCCT GGCCGATTCC GACCGGCTTT CCGCATGGCT CGACGTGCAT
GTTCCCGCGC TGGGGCACGG GCCGCTGGCG ATCGGAAAAA TCCATGGTGG CACCTCGAAC
GTCATTCTGT CGCTGGATCG CGGTGGCCGG ACGCTGGTCC TTCGCCGTCC GCCGATCGTC
CCGCCGCCGG GCAGCGCGAA GAGCATCTTG CGCGAAGCGC GGGTGCTGAC CGCGCTGAAC
GGCACCGATG TGCCGCATCC CGTCTGCCAT GCAAGCTGCG CCGACCCGGA CGTCATCGGC
GCGCCCTTTT ATGTCATGGA CCGTGTCGAC GGATGGTCTG GCGCCCTTTG CGACGGGCGC
ATTCATGACC GCCCGCCGTT CGACAAGCCT CCCCATGCCG GCGAGATCCC GTTTGCGATG
GTCGACGGGC TGATCGCGCT CGCCAATGTC GATTACCGCG CCGTCGGTCT CGACGATTTC
GGGCGGCCCG ATAATTTTCT GGAGCGACAG GTCGATCGCT GGGAAAGTCA GATCATAAGC
TATCGCCAAC TCTATGATTT CGAATGGCGT GAGCTGCCCG GCTATGCGCT CGCTCGCGAC
TGGCTTCGCG CGAACGCGCC GGACGATTTC CGGCCCGGTA TTATCCACGG CGATGTCGGG
ACGCCCAATG CATTGTTTGC CTTTGACCCG CCATGCCGCC TTGCCGCGCT GATCGACTGG
GAATTGTCAA CCATAGCCGA CCCGCTGCTC GATCTGGCAT GGTTCTGCAA CGGCATCTGC
GACGATCGAT TTCCGGGCCA TGTGCCTGAA AAGGCGCTGT ACAATGTGGA CCACTGGCCA
TCGCGGCAGG AATTGATGGC GCATTATGCC GTCGGCACCG GGCGCGACAT GGCGAGTTTC
GATTATTATC TGGTGCTGGC GATGTTCAAG GGTGGCTGTA TCCTGGAATA TAAGGTCGCG
CAGGCCGCCA AGGGCATTCT AAGCGCCGAA ACAGGCCACT TCTTCGACCG GCTTGTGCGC
GGCAATTTTG CCGAAGCCGA AAAGCTGATC CGACTGGTCG GCTAA
|
|---|
| Protein sequence | MSELRALADS DRLSAWLDVH VPALGHGPLA IGKIHGGTSN VILSLDRGGR TLVLRRPPIV
PPPGSAKSIL REARVLTALN GTDVPHPVCH ASCADPDVIG APFYVMDRVD GWSGALCDGR
IHDRPPFDKP PHAGEIPFAM VDGLIALANV DYRAVGLDDF GRPDNFLERQ VDRWESQIIS
YRQLYDFEWR ELPGYALARD WLRANAPDDF RPGIIHGDVG TPNALFAFDP PCRLAALIDW
ELSTIADPLL DLAWFCNGIC DDRFPGHVPE KALYNVDHWP SRQELMAHYA VGTGRDMASF
DYYLVLAMFK GGCILEYKVA QAAKGILSAE TGHFFDRLVR GNFAEAEKLI RLVG
|
|---|
| |