Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0822 |
Symbol | |
ID | 4080468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 825495 |
End bp | 826217 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638009181 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_615873 |
Protein GI | 103486312 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.591011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00503775 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATTAA CGAACGATCA TACGGTCAAA GCCTTCGACG AAGACCTCAA CCGCCTGCGC GGGCTGATCA GCGAGATGGG CGGTCGCGCC GAACAGGCGC TGCTCCAGGC GATGACGGCG CTGGGCAAGG GCGACCTCGA CCTCGCGGCG CAGGTCGTGC GCGACGACAG GAAGATCGAC GCGCTCGAGG CCGAGGTCGA ACAGCTGACG GTGCAGACGA TCGCGCTGCG CGCGCCGATG GCCGACGATC TGCGCGAAAT GATCGCGGCG CTGAAAATCG TCTCGGTCGT CGAACGCATC GGCGATTATG CCAAGAATAT CGCCAAGCGA GTCGCGCTGA TGGACCAGAC GCGCTCGATC GAGGCGATCC CGGTGCTGAT GTCGATGTCG AACATCGTCG CCGAACTGGT CCACGACGCG CTCGACAGCT TTGCGGCGCG CGACGCCGAA CTGGCGGTGC GGGTGACCGC GCGCGACAAG AATGTCGACG ATTTCTACAA CAGCATCTTC CGCACGCTCG TCACCTTCAT GATGGAAAAT CCGAAATATA TTTCGGAAAG CGCGCATTTG CTGTTCGTCG CCAAGAACCT CGAACGGATG GGCGACCATG CGACCAACAT CGCCGAGATG GTCTATTATG TCGTGACCGG CGAACATATG GAGGAGCGCG AGCGCGGGGA AACCCCCGAG GAAAGCGCCG CGGCGGAGAA GGAGCAAGGC TGA
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Protein sequence | MALTNDHTVK AFDEDLNRLR GLISEMGGRA EQALLQAMTA LGKGDLDLAA QVVRDDRKID ALEAEVEQLT VQTIALRAPM ADDLREMIAA LKIVSVVERI GDYAKNIAKR VALMDQTRSI EAIPVLMSMS NIVAELVHDA LDSFAARDAE LAVRVTARDK NVDDFYNSIF RTLVTFMMEN PKYISESAHL LFVAKNLERM GDHATNIAEM VYYVVTGEHM EERERGETPE ESAAAEKEQG
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