Gene Sala_0692 details

Gene Information

• Locus tag: Sala_0692
• Symbol: thrS
• ID: 4081951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingopyxis alaskensis RB2256
• Kingdom: Bacteria
• Replicon accession: NC_008048
• Strand: +
• Start bp: 698389
• End bp: 700392
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638009051
• Product: threonyl-tRNA synthetase
• Protein accession: YP_615746
• Protein GI: 103486185
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.86772
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCGACA TGATCCGCGT CACCCTTCCC GATGGCTCTG CCCGTGAAGT CGCGCGCGGG 
ACCACCCCGG CCGAGATCGC GGCCGCCATC GGCCCCGGCC TTGCCAAGGC GGCGCTGGCG 
GCAAAAATCG ACGGCGAACT GCGCGACATC ATGCGACCGC TGGAGGAAGA CACGAACCTG 
GCGCTGGTCA CCAGCCGCGA CGAGGCCGAT GCGCTCGAAC TCGCGCGCCA CGATTATGCG 
CATGTCCTCG CCGAAGCGGT GCAGACGCTG TTTCCGGGCA CGCAGATCAC CTTTGGTCCC 
GCGACGAGCG ACGGCTTTTA TTACGACTTC GCGCCGACCG CTGAACATGG CCCATTCCGC 
GACGAGGAAC TGCCGCTGAT CGAGGAGGAG ATGCGCCGCA TCATCGCCGC CGACAAGCCG 
CTGCGCCGCG AGGTGTGGGA CCGCGACGCG CTGATCGCCC GCTGGAAGAA GGACGGCGAG 
ACGTTCAAGG CCGAATGGGC GGCCGAGCTG CCCGCGGGCG AGGAGATCAG CGTTTACTGG 
TCGGGCGACG ACTGGATGGA CATGTGCCGC GGGCCGCATC TGGCGTCGAC GGGCAAGCTC 
GACCCGGCGG CGTTCAAGCT CACGCGGGTT TCGGGCGCCT ATTGGCGCGG CGACCAGAAA 
AATGCGCAGC TTTCGCGCAT CTATGGCACC GGCTGGCTGA ACAGGAAGCA GCTCGCCGAG 
CATCTTGTCC GGCTGGAGGA AGCGGCCAAG CGCGACCATC GTCGGCTGGG GCAGGAGATG 
GACCTGTTCC ACCTGCAACA GGAGGCGCAT GGTTCGGTCT TCTGGCATCC CAATGGCTTC 
GTCGTGTGGC GCGAGCTCGA GGCCTATATG CGCCGCGCGA TCGACGCCGC GGGCTATCGC 
GAGGTCAAGA CGCCGCAGGT GATGGACGCG CGCCAGTGGG AACAGTCGGG CCACTGGGGC 
AAATATCGCG AAAATATGTT CGTCATCCCC GACGAGGTGC CGAACACCGA GGATGAAGGC 
CCGATCGTCT CCGACGATGC CGAGTGGATG GCGCTGAAGC CGATGAATTG CCCGGCGCAT 
GTGCTGATCT TCCGCCAGGG CATGAAAAGC TATCGCGACC TGCCGCTGCG GCTTTACGAA 
AATGGCTGCT GCCACCGCAA CGAACCCCAC GGTGCGCTGC ACGGGCTGAT GCGCGTGCGC 
CAGTTCACCC AGGACGACGC GCATATCTTC TGCCGCGAAG ATCAGATCGT CGAGGAAGTC 
CGCAATTTCT GCGCGCTCGC CGACCGCATC TACAAGGATT TCGGCTTCAC CTATGCGATC 
AAGCTGGCGC TGCGTCCCGA AAAGCGCTTC GGCAGCGACG CGATGTGGGA CAAGTCCGAG 
GATGAGCTGC GCAACGCGGT GATCGAGGCG GGGCTTGCGA CCGAGCAATA TGGCTGGGAG 
GAACTGCCCG GCGAAGGCGC CTTCTATGCG CCCAAGCTCG AATGGCATCT GACCGACGCG 
ATCGGCCGGA CGTGGCAGGT CGGCACGATC CAGTCCGACC GCGTGCTCCC CGACCGGCTC 
GACGCCTCCT ATATTGGCGA GGATGGCGAG CGGCATCGCC CGGTGATGCT CCACCGCGCG 
ATCTTCGGCA GCTATGAACG CTTTATCGGC ATTTTGATCG AGCATTTCGT CGGCCGCTTC 
CCGACCTGGC TCGCGCCGGT GCAGGCAGTC GTCGCGACGA TCGTCAGCGA CGCCGACGAT 
TATGCGAAGG CCGCGACCGC ACGGCTCGTC GCCGCGGGCA TCCGCACCGA GAGCGATCTG 
CGCAACGAAA AGATCAACTA CAAGGTGCGC GAACACAGCC TCGCCAAAGT CCCCCACCTG 
CTCGTCGTCG GCAAGCGCGA GGCCGAGGAA GGCACCGTCG CGATCCGCAC GCTGGGGCAG 
GACGGCCAGC GCATCATGCC GCTCGCCGAA GCGATCGCGA TGCTGAAGAC CCAGGCGACC 
CCGCCGGACC TCAAGGTCCG GTGA 

 

Protein sequence

MSDMIRVTLP DGSAREVARG TTPAEIAAAI GPGLAKAALA AKIDGELRDI MRPLEEDTNL 
ALVTSRDEAD ALELARHDYA HVLAEAVQTL FPGTQITFGP ATSDGFYYDF APTAEHGPFR 
DEELPLIEEE MRRIIAADKP LRREVWDRDA LIARWKKDGE TFKAEWAAEL PAGEEISVYW 
SGDDWMDMCR GPHLASTGKL DPAAFKLTRV SGAYWRGDQK NAQLSRIYGT GWLNRKQLAE 
HLVRLEEAAK RDHRRLGQEM DLFHLQQEAH GSVFWHPNGF VVWRELEAYM RRAIDAAGYR 
EVKTPQVMDA RQWEQSGHWG KYRENMFVIP DEVPNTEDEG PIVSDDAEWM ALKPMNCPAH 
VLIFRQGMKS YRDLPLRLYE NGCCHRNEPH GALHGLMRVR QFTQDDAHIF CREDQIVEEV 
RNFCALADRI YKDFGFTYAI KLALRPEKRF GSDAMWDKSE DELRNAVIEA GLATEQYGWE 
ELPGEGAFYA PKLEWHLTDA IGRTWQVGTI QSDRVLPDRL DASYIGEDGE RHRPVMLHRA 
IFGSYERFIG ILIEHFVGRF PTWLAPVQAV VATIVSDADD YAKAATARLV AAGIRTESDL 
RNEKINYKVR EHSLAKVPHL LVVGKREAEE GTVAIRTLGQ DGQRIMPLAE AIAMLKTQAT 
PPDLKVR