| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0439 |
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| Symbol | |
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| ID | 4082986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 448367 |
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| End bp | 449281 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008796 |
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| Product | phage integrase |
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| Protein accession | YP_615493 |
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| Protein GI | 103485932 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCA CGCAGATTGC CAGATACGTC TCGCTGTATC GCAGCTTGGG GCGGAAGTTC
TCGGAACAGG AACGACTGCT GCGCCAATAC GCCGCTTTCG CTGAACGCTT CGGTGACCGG
CACACCCGAG TGCAGCGCAT CTACGACTGG TGCCACACGG CAAGCTCGCA AAACGTGGCT
CGCCATAGGT ACGACGCTGC TCGTAACTTC AGCCTTTTCG CTCATGCCGA GGACCCAGAC
AACGAAGTCC CGCCTGTCGG CGTTTTCGGC CGGGGGAAGC GGCCACGTCC CACTCCGACC
ATAATCGAAG CGGACCAGGT GCGGGCGATC ATGGCGGCGG CATTGAACGT TCCGCCCCAT
GGCACGATTA GCCCATACAC GTACCATTAC CTGTTCGGCC TGCTCGCGGC GACAGGTCTC
CGGATTTCCG AGGCTCTCGC GCTACAGTGC AACGATCTGG TCGAGGATGG GCTGGTCGTC
CGCAACGGCA AGTTCGGCAA GCAGCGACTG ATCGCCTTGC AGCCATCGAC GCGCCAAGCA
CTCGAAGCCT ACATTGCGAT CCGCGCGAAG CACCCGGCCA AGTGTAATGA CCTGTTCGTC
ACTATCCGGG GGCGGGCGCC GCACAAGGTG CGCGCCCACG TCGTGTTCGT CAGGTTGGCC
CGGCTTCTCG GATATCGTGG AGCAACCGGT ACGGCAGGCA TGCGACTCCA CGATCTGCGA
CATACGTTCG CTGTTCGCTC GCTTGAGTCC TGCCCGCGTG ACAGGGAGGC CATTGCCCAC
CACATGGCCG GTCTCAGTGT CTACCTGGGG CACGCGTCGA TCGCCAACAC GTACTGGTAT
CTCGAAGCCA CGCCAGTGCT GCTGCGCGAC ATTGCGGCTG CAAGCGAGCA ACTTTTTCAA
GGAGAAGCGG CATGA
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| Protein sequence | MLSTQIARYV SLYRSLGRKF SEQERLLRQY AAFAERFGDR HTRVQRIYDW CHTASSQNVA
RHRYDAARNF SLFAHAEDPD NEVPPVGVFG RGKRPRPTPT IIEADQVRAI MAAALNVPPH
GTISPYTYHY LFGLLAATGL RISEALALQC NDLVEDGLVV RNGKFGKQRL IALQPSTRQA
LEAYIAIRAK HPAKCNDLFV TIRGRAPHKV RAHVVFVRLA RLLGYRGATG TAGMRLHDLR
HTFAVRSLES CPRDREAIAH HMAGLSVYLG HASIANTYWY LEATPVLLRD IAAASEQLFQ
GEAA
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