Gene Sala_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0435 
Symbol 
ID4082982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp443726 
End bp444460 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID638008792 
Producthypothetical protein 
Protein accessionYP_615489 
Protein GI103485928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.379995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAA CAGCAGAAAT CCCCGTTTCT AGAGTTGAGT GGAAGGGCGC TGTCAGGATC 
ATCCGCAGCG CCTTTCCGCC GATCGACCTG TTCGAGGACA TCGCCGATCC CGCGGACTGG
CCGCTGCTGA TTTCGGCCGA GCAAAAGACC AATCCTCGCA TCATGGCGAC TATTGGTAAC
CTCGACCTCG TTCCGGTTGA CCGCCGCGTC GGCGGCAATG GTGCCTCCTA CCTCATGGCA
CCATTTACCC ACGTTAGCAC CGATCGACCG AGCCGCTTTA CCGATGGCAG CTACGGCGTG
CTCTATGTTG GGGACCGTTT TGAAACCGCA CTGTTCGAGA CGATTTACCA TCACGCCCGC
TTCATGGCCC GAACCCGGGA AGAGCCGGGA TGGACCTCGC AGTTCCGCGA AATCATCATG
TCGGTCGATG TAGACTTACA TGATCTCCGA ACTCTGGTGG GGAAGCCGGA TTCGGCGCTC
GATCCTGACA GCTACGCTGC ATCTCAAGCG CTCGCGCGGC ACCTCAGGGG CGCGGGATCG
AACGGGATTG CCTACCCGAG CATCAGGCAC CCCGGCGGGG AATGCGTCGC GCTCTTCTAC
CCGGACTGCG CATCAAATCC GCTCCAGGGG CGGCACCTCG ACTATCACTG GGATGGCGCG
CGGGTTGATC TGGTCCGTGA TGCGGGATCG GGCGCTGTCT TCCGGATTGT CGATTTGCCG
CCCGATCCCG CCTGA
 
Protein sequence
MSETAEIPVS RVEWKGAVRI IRSAFPPIDL FEDIADPADW PLLISAEQKT NPRIMATIGN 
LDLVPVDRRV GGNGASYLMA PFTHVSTDRP SRFTDGSYGV LYVGDRFETA LFETIYHHAR
FMARTREEPG WTSQFREIIM SVDVDLHDLR TLVGKPDSAL DPDSYAASQA LARHLRGAGS
NGIAYPSIRH PGGECVALFY PDCASNPLQG RHLDYHWDGA RVDLVRDAGS GAVFRIVDLP
PDPA