| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0414 |
|---|
| Symbol | |
|---|
| ID | 4082366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 423120 |
|---|
| End bp | 423605 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638008771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615468 |
|---|
| Protein GI | 103485907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.697482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.534304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCGA ATTTTCTGAG ATTGCGCAAA ATGACACGTG CAGAATGGTC TGCGATGTCC
TTTTACGAGA AATTCGAGGA CGCGATTGTC ATCGTTCTCA GCGGAATAAT CGCAATCGTC
GTGATTGCGG CGGTTTGGTC ATTGCTGCGC GAAGTTGTCA CAAGCCTTGT CTTGGGCGCT
CTTGATCCGC TCGATTTTGC CACTTTCCAG ACTGTCTTCG GAATGATTTT TACTGCTGTG
ATTGCGCTTG AGTTCAAGCG TTCATTGCTC GTAGCTGCCG ATAGGGGATT CGGTGTCCTG
CAGGTGCGAA CGATTATCCT GATTGCGCTG CTGGCAATTG TGCGCAAGTT CATCATTCTC
AATCTGGCAG ACACGAGCGC CGCGAAGGTC GCCGCGCTTT CGGGGGCTGT GCTGGCACTT
GGTGCGGTAT TCTGGCTCGT TCGCGATCAG GATCGGCAGG AGCGGCTTGA GCAAGCACAG
GAATAG
|
|---|
| Protein sequence | MLANFLRLRK MTRAEWSAMS FYEKFEDAIV IVLSGIIAIV VIAAVWSLLR EVVTSLVLGA
LDPLDFATFQ TVFGMIFTAV IALEFKRSLL VAADRGFGVL QVRTIILIAL LAIVRKFIIL
NLADTSAAKV AALSGAVLAL GAVFWLVRDQ DRQERLEQAQ E
|
|---|
| |