Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0383 |
Symbol | |
ID | 4081970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 395730 |
End bp | 396230 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638008742 |
Product | heat shock protein Hsp20 |
Protein accession | YP_615439 |
Protein GI | 103485878 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.170778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTC GCGATCTCAT TCCCTGGAAA AGCCAGGGCC AGGACATCGC TCCCCGGCAG GAGGAGCGGG TCGATCATCC GGTGATGTCG CTTCATCGAG ATATCAATCG CTTGTTCGAC GACATGTTTC GCGGGTTTTC AATGCCCTCG CTGCCGTCCA TCGGGCGCAG CCTTGGCTTG CCGCGGGTCG AGCTGTCGGA GAACGACAAG GAAATCCGTG TCACGGCCGA GTTGCCGGGC ATGGAGGAAA AGGACATCGA AATCAGCCTG GACAATCACC AGCTGGTGAT CCGGGGCGAA AAGAAGTCCG AAACCAGCGA CGAGGAACGC GGCTATTCCG AACGTAGCTA TGGCCGCTTC GAGCGTCGCA TCGGCCTGCC TTCGCAGATC GATGAGGACA AGGTCGAGGC GGCCTTCCGC AATGGTGTTC TGACCGTTAC GGTTCCGCGT ACCGCAGAAG CGGCACATGG ACGCAAGACG ATCCCGATCA ACGCCGGTTA A
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Protein sequence | MAIRDLIPWK SQGQDIAPRQ EERVDHPVMS LHRDINRLFD DMFRGFSMPS LPSIGRSLGL PRVELSENDK EIRVTAELPG MEEKDIEISL DNHQLVIRGE KKSETSDEER GYSERSYGRF ERRIGLPSQI DEDKVEAAFR NGVLTVTVPR TAEAAHGRKT IPINAG
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