| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0326 |
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| Symbol | |
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| ID | 4082357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 332423 |
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| End bp | 333205 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638008685 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_615382 |
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| Protein GI | 103485821 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGACC AAAGCCTGAA AATCCTCGAT GCCTTGCCCT TCGGCACGGG CATCCTGCTG
GCCGGGCTGA CCGGGCTGCT GCTGGGCAGT TTTATAGCGA CGCTGGTGCT GCGTTGGCCG
GAGGGGCGCT CGCTGCTCGG GCGCTCGCAG TGCGACGGCT GCGGACGGGC GCTCGGCGTG
CGCGATCTTG TCCCGCTTGT ATCGGCGGCG CTGTCGCGCG GGCGGTGCCG GACGTGCGGT
GCGAGGATCA ACCCCTTTCA TGGCCGGGTC GAGCTTGTAT CGGCGCTGAT TGGCGCCGGG
GCGCTGGCGC TGCTTCCGGG CACGGCGGGC TGGCTCTGGG CGCTGTTCGG CTGGTTGCTG
CTGCCGCTCG CGCTGCTCGA TGCGCGGCAT TTCTGGCTGC CCGACCGGCT GACGCTGTTG
CTGGCGGTGA CGGGGGTGTT GCTGGCGGGA CCGATGCTCG GCACGTCACT GGTCGATCGC
TGGGTCGGAG CGCTGGTTGG CGGTGGCACG CTCGCGCTGC TCGCGTGGCT CTATGCGCGT
GCGCGCCGAC GGGAAGGCAT GGGGGGCGGC GACCCCAAAC TCGTCGCGGC GACGGGCGCG
TGGCTCGGCT GGCAGGCCTT GCCGCTGATG CTGCTGCTCG CGAGCCTTGG CGGAATCATC
TGGGCGCTCG TCGTCCAGCG AAAAGGGGAC CAGCCGCTCG GCGAGCGGCG AGTCCCCTTC
GGTATGTTCC TTTGCGGTGC CGCCTTTGCC GCGGTGCCGC TGTGGCCGCT TATCGCCCGA
TGA
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| Protein sequence | MVDQSLKILD ALPFGTGILL AGLTGLLLGS FIATLVLRWP EGRSLLGRSQ CDGCGRALGV
RDLVPLVSAA LSRGRCRTCG ARINPFHGRV ELVSALIGAG ALALLPGTAG WLWALFGWLL
LPLALLDARH FWLPDRLTLL LAVTGVLLAG PMLGTSLVDR WVGALVGGGT LALLAWLYAR
ARRREGMGGG DPKLVAATGA WLGWQALPLM LLLASLGGII WALVVQRKGD QPLGERRVPF
GMFLCGAAFA AVPLWPLIAR
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