Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0300 |
Symbol | |
ID | 4082863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 299483 |
End bp | 300412 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008658 |
Product | hypothetical protein |
Protein accession | YP_615356 |
Protein GI | 103485795 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.228205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGCA GCGCCGCCTT GCCCGCGCTG CTTCTGATTG GCGCACTCGC AGCGTGCGGC GATGATCCCG ACACTCCGCT GGCCGAAACC AAGCCCCCCG AATGCCCCGC GATGCCGGCA CAGGATTATG CCTGGATCCC CGGCGCGACC TTCACCCTCG GTGCCGACGC GCAGCTGCCC GAAGAGGGGC CGCCGCGCGA AGTCACGGTC GCGGGCTTCT GGATCGCGAC GCACGAGGTC ACCAACGCCG AGTTCGCCGA ATTCGTCCGC GCGACGGGCT ATAAAACGCT CGCCGAGCAA GACCCGCCGC CGCTGCCCGG CGCGCCGCCC GACATGCTTA TCCCCGGTTC GGCGGTGTTC ACCGCGCCGA CCGACGGCAA TCCGAACTGG TGGCGCTGGG TCGTCGGCGC CGAGTGGCGT CACCCCGCCG GACCCGCGAC GAACATCGAC GGGCGCGGCC GCGACCCGGT GGTGCAGATC GGCTATGAGG ACGCGCTCGC CTTCGCCAAA TGGAAGGGCA AGACGCTGCC GAGCGAGGAG CAATGGGAAC TCGCCGCGGC GAGCGGCGGC GCCGACCGCA ACGTCCCCGT CGGCAAAGAC GGCAAACCGC GCGCCAATTT TTATCAGGGC AGCTTTCCGC TGCGCGACCT TGGCACCGAT GGCTTCACCG GCCGCGCGCC GGTCGCCTGT TTTCCCGCCG ACGCGCACGG CGTCCACGAC CTCATCGGCA ATGTCTGGGA ATGGACGACG AGCGCGGCAG GCAGCGAGCG CAATGTCATC AAGGGCGGCA GCTTCCTGTG CGCCGCCAAT TATTGCGCCC GCTATCGCCC CGCCGCGCGC CAGTTCCAGG AACGCAGCCT GGGAACCGAC CATATCGGCT TCCGCCTGAT CGACCCGGCG CGCCCGGCGC CGGACAAACC CACGCCGTAG
|
Protein sequence | MIRSAALPAL LLIGALAACG DDPDTPLAET KPPECPAMPA QDYAWIPGAT FTLGADAQLP EEGPPREVTV AGFWIATHEV TNAEFAEFVR ATGYKTLAEQ DPPPLPGAPP DMLIPGSAVF TAPTDGNPNW WRWVVGAEWR HPAGPATNID GRGRDPVVQI GYEDALAFAK WKGKTLPSEE QWELAAASGG ADRNVPVGKD GKPRANFYQG SFPLRDLGTD GFTGRAPVAC FPADAHGVHD LIGNVWEWTT SAAGSERNVI KGGSFLCAAN YCARYRPAAR QFQERSLGTD HIGFRLIDPA RPAPDKPTP
|
| |