Gene Sala_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0222 
Symbol 
ID4083002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp231217 
End bp231849 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID638008581 
ProductDSBA oxidoreductase 
Protein accessionYP_615279 
Protein GI103485718 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CGCGCGTCGA GTTTTTCTTC GATCTATCCT CGCCCTGGAC CTGCCTCGCC 
TTTCACAACC TGCCTGCCGT GCTCGAACGG ACAGGCGCGA GCGCGCTGTA TCGGCCGATC
CTCGTCGGCG GCGTGTTCAA TGCGGTCAAT CCCGCCGTCT ATGCGGCGCG CGAGCAGACC
GACAACCGGC GGCTCCAGCA TAGCTGGAAG GTGCTGAAGG ACTGGGCGCG CCTTGCCGAC
GTGCCGATGA ATTTTCCCTC GCGATGGCAT CCGGCAAAGA GCATCGCCGC GATGCGTTTC
TGCTGCGCGA TCGAAGCGGA TCAGGCGGCG CTCGTCCGCT TTGCGCGCGG CGCCTTCGCG
AGCTATTTCG ACCGGCAGGA AAATCTCGAC GACCCGGTGG TGCTCGCGGC GGTCGCCGAT
GCCGAGGGGC TCGACGGCGC CGCGCTCGCC GCCGCGGCGG GGAGCGATGC GGTCAAGGCG
CGGCTGCGTG CGAACACCGA TGAACTCATC GCGCGCGGCG GCTATGGTTC GCCGACGATC
TTCGTCGATC GCGATGACAT GTATTTCGGC AACGACCAGC TTCCGCTTGT CGAGGCGGCT
CTAAAACATA AAACGCAGAG GACTCTCGCA TGA
 
Protein sequence
MTAARVEFFF DLSSPWTCLA FHNLPAVLER TGASALYRPI LVGGVFNAVN PAVYAAREQT 
DNRRLQHSWK VLKDWARLAD VPMNFPSRWH PAKSIAAMRF CCAIEADQAA LVRFARGAFA
SYFDRQENLD DPVVLAAVAD AEGLDGAALA AAAGSDAVKA RLRANTDELI ARGGYGSPTI
FVDRDDMYFG NDQLPLVEAA LKHKTQRTLA