Gene Sala_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0161 
Symbol 
ID4082919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp160619 
End bp161113 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID638008520 
Producthypothetical protein 
Protein accessionYP_615218 
Protein GI103485657 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.497639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCCCT GCCTCCGCAG GGGCACAAAC ACGAAAGCGG GCCCGATGAG CTTCACACTC 
GCTTATAATC TCGACGAAGC CGACGCCATC GGCGCGGCGA TCGGCGGCGT GCTGGCGCCC
GGCGACGTCG TGCTGCTGTC GGGCGATCTG GGCGCGGGCA AGACGACCCT CGCGCGCGCG
ATGCTGAAGG CGCGCGGGCT GGCGGGCGAA GCGCCGAGCC CGACCTTCGC GATCGTCCAG
CCCTATGCGC CGCCCGAGGT CGACCTGCCC ATCGCGCATG TCGATCTCTA CCGGATCGAG
GAGCCGCGCG ACCTCATCGA ACTCGGCCTC GACGATTATC TTTCCGACGG CGCGCTGCTC
ATCGAATGGC CCGATCGGCT GGGCGGCGAC GGCTGGCCGG GTGCGCTCGA ACTGACGATT
TCGGGCGCGG GCGATGCGCG TGTCTTGACA GCGAGAGTGC CGCCCGCTTG GGAGGCGCGA
TGGCCGCTTC CATGA
 
Protein sequence
MGPCLRRGTN TKAGPMSFTL AYNLDEADAI GAAIGGVLAP GDVVLLSGDL GAGKTTLARA 
MLKARGLAGE APSPTFAIVQ PYAPPEVDLP IAHVDLYRIE EPRDLIELGL DDYLSDGALL
IEWPDRLGGD GWPGALELTI SGAGDARVLT ARVPPAWEAR WPLP