Gene Sala_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0109 
Symbol 
ID4082104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp107862 
End bp108512 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID638008469 
Productoxidoreductase FAD-binding region 
Protein accessionYP_615167 
Protein GI103485606 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAGGC CGTTCGCGCA CATCGCAGGC CAACATGTCG ATGTCCGGCT GACCGCGCCT 
GATGGCTATA GCGCGATGCG CAGTTACTCG ATCGCGTCAT CGGCAGCCTC GTCCCCGATC
ATCGAGCTCG CTGTCGAACG CCTGCCCGAT GGCGAGGTGT CGGCCTATTT TCACGATATC
GCGATAGTCG GCGATGAGAT CGAGCTTCGC GGTCCGCTCG GCGGGCACTT CCTATGGCCT
GAACCTGCCG TAGACGCGGT GCTGTTGATC GGAGCAGGCT CCGGGCTCGT GCCGTTGATG
GCGATGATCC GGCATCGCCG CACACAAGAC CCGGCCGTGC CAACCGCGTT GCTCCTGTCC
GCGCGCACCG CTGAGGATGT TCTGTTTTCG GAAGAACTAC ATTCCGTCGA GATCAACGAT
GCCGCATTTG TCCTGGCGCT GGCGATCACG CGCGAAGATC CGATCCGCGC ATCGGATTTC
GGGCGGCGGA TCGACAGCGC CATGGTCGAA GAGGTTCTCG CCCGGCTTCA CCGAAAGCCC
ACACAGATAT TCGTTTGCGG ATCCAACGAT TTCGTCAACA TTGCGACCGA GGGAGCGCTG
CTGGCCGGGG TCGACCCCTC GATAATCAAG ACCGAGCGCT ATGGTGGTTA G
 
Protein sequence
MSRPFAHIAG QHVDVRLTAP DGYSAMRSYS IASSAASSPI IELAVERLPD GEVSAYFHDI 
AIVGDEIELR GPLGGHFLWP EPAVDAVLLI GAGSGLVPLM AMIRHRRTQD PAVPTALLLS
ARTAEDVLFS EELHSVEIND AAFVLALAIT REDPIRASDF GRRIDSAMVE EVLARLHRKP
TQIFVCGSND FVNIATEGAL LAGVDPSIIK TERYGG