Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0109 |
Symbol | |
ID | 4082104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 107862 |
End bp | 108512 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008469 |
Product | oxidoreductase FAD-binding region |
Protein accession | YP_615167 |
Protein GI | 103485606 |
COG category | [C] Energy production and conversion |
COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAGGC CGTTCGCGCA CATCGCAGGC CAACATGTCG ATGTCCGGCT GACCGCGCCT GATGGCTATA GCGCGATGCG CAGTTACTCG ATCGCGTCAT CGGCAGCCTC GTCCCCGATC ATCGAGCTCG CTGTCGAACG CCTGCCCGAT GGCGAGGTGT CGGCCTATTT TCACGATATC GCGATAGTCG GCGATGAGAT CGAGCTTCGC GGTCCGCTCG GCGGGCACTT CCTATGGCCT GAACCTGCCG TAGACGCGGT GCTGTTGATC GGAGCAGGCT CCGGGCTCGT GCCGTTGATG GCGATGATCC GGCATCGCCG CACACAAGAC CCGGCCGTGC CAACCGCGTT GCTCCTGTCC GCGCGCACCG CTGAGGATGT TCTGTTTTCG GAAGAACTAC ATTCCGTCGA GATCAACGAT GCCGCATTTG TCCTGGCGCT GGCGATCACG CGCGAAGATC CGATCCGCGC ATCGGATTTC GGGCGGCGGA TCGACAGCGC CATGGTCGAA GAGGTTCTCG CCCGGCTTCA CCGAAAGCCC ACACAGATAT TCGTTTGCGG ATCCAACGAT TTCGTCAACA TTGCGACCGA GGGAGCGCTG CTGGCCGGGG TCGACCCCTC GATAATCAAG ACCGAGCGCT ATGGTGGTTA G
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Protein sequence | MSRPFAHIAG QHVDVRLTAP DGYSAMRSYS IASSAASSPI IELAVERLPD GEVSAYFHDI AIVGDEIELR GPLGGHFLWP EPAVDAVLLI GAGSGLVPLM AMIRHRRTQD PAVPTALLLS ARTAEDVLFS EELHSVEIND AAFVLALAIT REDPIRASDF GRRIDSAMVE EVLARLHRKP TQIFVCGSND FVNIATEGAL LAGVDPSIIK TERYGG
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