Gene Sala_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0103 
Symbol 
ID4082098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp103932 
End bp104402 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID638008463 
Producthypothetical protein 
Protein accessionYP_615161 
Protein GI103485600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.76812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC TCGAACCCCA AGCGCCGGAT CTTCGGGTGC AGAAATGGAT CGGCGCGGAC 
GGAGAAAGCA CCGGGCCGCT CAAGCTGTCG GATCTCGGCT CCGGCCCAAA GATCCTGTTC
GCCTTCCAGC ACTGGTGCCG CGGCTGCCAT GTGCATGGCT TCCCGACGCT ACAAAGATTG
CATAGTGCAT TGAGCCCCAG GGGCGTGGGA TTTGCGGTGA TCCAGACCGT CTTCGAAGGT
GCGGATGAAA ACACCTTCGA GAAGTTGCGT GTGAACCAGC TCGAATATGC GCTTCCTGTC
GCCTTCGGCC ATGATGAACC ACTGGTCGGC GCGACGCTGC CTACCTTCAT GGAGGATTAT
CGCACGCGAG GAACGCCCTG GTTCTCGATC ATTGACGCTG GCGGCCGTAT CGTCTTCTCG
GACTTCCATC TCGACGCGGA CAGGATCGTA AAGGATCTGG AGCTGGTGTA A
 
Protein sequence
MSMLEPQAPD LRVQKWIGAD GESTGPLKLS DLGSGPKILF AFQHWCRGCH VHGFPTLQRL 
HSALSPRGVG FAVIQTVFEG ADENTFEKLR VNQLEYALPV AFGHDEPLVG ATLPTFMEDY
RTRGTPWFSI IDAGGRIVFS DFHLDADRIV KDLELV