Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0049 |
Symbol | |
ID | 4081543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 51177 |
End bp | 54644 |
Gene Length | 3468 bp |
Protein Length | 1155 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638008410 |
Product | hypothetical protein |
Protein accession | YP_615108 |
Protein GI | 103485547 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATTCC AGCTGCTCGA TCTGGTCCGC TATGGCGGTT TTGCGGATCG CGTCGTCACG TTCGGGCCGG GGCGGCCGGA TCTTCATCTC GTCATGGGGC CCAACGAGGC CGGCAAGTCG ACCATGCTAG AGGCAATTGG CGATCTGCTG TTCGGAATTC ATGCGCAAAC GGCGCAAGGC TGGCGCTTTG ACTATGGAGA GCTTCGCATT CGCGCGGTTC TGGAGCATCA AGGCAGTGTG GTAGAGATCA CTCGCCGCAA GGGTAGCCGC AACACCCTGC TTGCCACCGA CGGAACTGCG CTCCCCGAGG ACATCCTGGT TCCTTTTCTC GGCGGGATAG ACCGGACGAC TTTCGAGCGA ATGTACGGTC TCGATCACCA GAAACTCCGG TCCGGCGGCC TTGCGATTCT GGAGGGCAAA GACGACGCTG CGCGCCTTGT TCTCGAGGCC GGCAGCGGGC TGAGTGTTGT CGGTGCGGAG TTGGCCCGCC TCGAACGGGT TGCGGGCGAA CTCTTCAAGC CCAACGCCCA GATTCCACCC GTCAACCGGC TGATGCGAGA GCGGGGCGAA GCCCAGGCGA TTGTCCGTTC GTCGGCGCTG ACGGACAGCG CGTGGAGTGC GATTATCGCC GCCGAGCGAC GAGCTGGTGA ACAACGATCC GAATTGCAGG TTGAAAGTCG CGAGCTTGCG ACACGGGCCG CTGCACTAGA AAGGACCAAT CGGGCGCGGG CGCCTTTGGC GCGCATTGGC GAAATCGACG CCGAACTCGA GGCGTTGGGC GACATCAAGC TATTTCCCGC CGATGCCGCA TCCCGGCTCA ATGCAGCCAT CGCAAATCGC AATACGGCGC AGGAACTCCA GAATCAGCAT AGCATCCAGT TGGACAGGGC AAAGAATGTC TTGTCGTCAA TCACACTTCC CGAGCTGCTG CTTGCTGAAC GGGAGCGGGC CGAAGCACTT GAGGAACGAC GGCCTGTGGT CGAAAAGGCA GTGGCGGATA TCGCGCGCCG AACCGGCGAG CTTGAGCGGT CCGAGGCGCG TATCGAAACC GCCCGCTCCG AGGCGCGCTT ACCGGCTGGT GCCGCTTTGC CATCGGCGGG ATGGCGCAAG CGCGCACGCG AGTATCTGCA AGACCGACGC GCGCTGGCGG AGCGGCGCGT CCGCCTGAGC TTGGCCCTGA GTGAAGCGGC ACTGGCCAAA GCCAAGGCGG AAACCGACCT AGCAGCATTG CCGCCCCCCA TCGAGCTGGC CGGGCTGACG GATGCAATTA CTGCGGTCCC CGCTGACTTC GCGGAGCGGG TGACGAGTGC AGAAGAACGG TTGATCCGGG CAGAGCGCCG AATGCAGATC GAGCGCGCCA GTCTTTCCCC TTGGGCGGGA GAAATTGACG GGCTCGGAAC GATGTCCTTG CCCGTGGATG TTGTAGTTAG CGAACATCAG GCCCGGATTG AAGTTGCCAA CGCGCAACTG GCCCAGGCCA AGTTGGCCAT TTCCAACTCG AGCGAAGCCA GCGTCAAAGC GACGGCGCGC CTTGCCGGCT TGTCGGCTGC GGGGGATCTC CCAACACCAG AAGCCGTTCT CGCGGCGCGC GAGCTACGCG ACAGTGCCGT AGAGGATGTC CGGGGACGCC TCGCCCGGCC GCGCGAGCCC GGTGACGAGG ATGCCGGAGT CGCGCTGTCT CTCGCAGTCG AGCGCGCGGA CGCAGTCGCC GATCGGCGCG ACGCGGAAGC AGATCGTATC GCTGAACTTC TGCTTGCCCG CACCACTTCG GCCGAAGCCG ACGCGTTTCA CCAAGCCAAT CGGCTCCTCG TCGAAGAGGC CGAAGCGGCC TTAGAGGAGG CTAAAGCAGA TTGGGCGAGC CTGCTGGCAC CGCTCGGCCT CGTGCTCCCG CCGGCGGCGC TCGCGGCGTG GCGAGCGAGC CGTGAGCGCG TGCTCGAGGC CTTTGAGGAA CAGGCCGCCG CAAAGACTGG CCTCGACCGG CTCAAAGCAA CTGCGGCCGC GGCGCTGACT AAATTAGCGC AGATCTCGTC CGCGGCAGGA TTTCAAATCG AGGCAGAGAT GGAGTTGGCG GACGCCGTGC GTGCCGCCAA AGCGCGTCTA TCGGCGCTGG AGGTGGCGGA CAGGCTGCGT GCGGCCGCCA ATGTTGTGAT GGCGGGTGTA GCAACAACGC TTGACGAGCT GGCGCGGGAG GAGCGCGAGA TTGTTTCGCG CGGTGCCGTC CTCGACGAGG ACCGTGGCGC TTTGATGGTC GAAGCCGGAT TGCTCGAGGA CGCCGGCGAC CCCGCGATTT CCGATGCAAT CGAAGCGACC GAAGCCGTCG CTGCCGAAAT CGCCACGGCG GACGGGCTGC GGCGCCAGAT CAACGGAATG AAAAAGGATA TCGACGCGTT CGAGGCGGAT GCCAACACTC TTTTTGCCGC GGTTGGACAT GACGCGCCTA CCCGCCATTC GGAGGACGTG CACGCGCTGA CACTGACGCT AAAGGCCGGG CTTGCCGAAA AACTAAAGGT TGAGCGAGCC CGCGAGGATA TTATCGCGGC ACAGGCCGGA ATTCAGGAAT CCGAGGCGCG CGCGGCCGCG GCAAACGCGG TCGTCGCAGA GCTGCTCGGC ATAGGCGATA TCACCGAGGA GGCGGCATTG CTGCCAGCCA TCGCGACGAG CACGCATTCG ATTGCGCTGG GCACTGCGCG GCAAACCGCG TTGAACGATC TTGTAGAGAT TAGCGGCGGC AGGAGCGTCG AGGAGTTGAC TGCCGACGTC GCCGTGATCG GTGCGGACGA AGCAACTGCC GAGCTGGAGG CGATTGCGGA CCGGCAGCAT GAAATAGGGG CCGAGCGCGA GGCAATCGGG AAGGTGCTTC GCGAATCCGA ACTTGCGCAC GACAATGCAG CAACCGAAAC CTTGGCAGCG GATGCGCAGC AGCGCGTAAA GGAAATTGAA GCGGCGCTGC TCGACGCGGC CGAGCGCCAC GTCGGCGCCG CCGCGACAGC CGCCATGCTG CGCTGGCTGA TCGGCAAGCA TCGAGCGGAA AGCCAGGGGC CACTGATCGC TCGCGCAGGG TCGTTGTTTC AGGAGATGAC CCATGGATCT TTCGCTGGGC TCGGCCTTGA CTATGGTGCA GACGATCAGC CCAGAATGGT TGGCCTGCGG CAGGGCGGGG AGCGCGTTGG GGTCGATGGG ATGTCCGAAG GAACGCGGGA TCAGCTCTAT CTGGCGCTGC GCCTGGCTTC AATCGACGAG CGCGCGGCAG GGGGAATGCC CTTCATCTGC GACGACATCC TGATAACTGC CGACGAGCCG AGGTCGGCGT CCATGTTGAG CGCATTGGGA GCGATTTCGA GACGGACTCA GGTCATTGTC TTCACGCACC ACGAACATAT CGTCGATTTG GCGCGGAGGA CACTCGGCGA CGATGGCTTC ACGTTGCATC GGCTTGACGC TGAAATAGCC GTCATCGCAG CTGCGTAA
|
Protein sequence | MRFQLLDLVR YGGFADRVVT FGPGRPDLHL VMGPNEAGKS TMLEAIGDLL FGIHAQTAQG WRFDYGELRI RAVLEHQGSV VEITRRKGSR NTLLATDGTA LPEDILVPFL GGIDRTTFER MYGLDHQKLR SGGLAILEGK DDAARLVLEA GSGLSVVGAE LARLERVAGE LFKPNAQIPP VNRLMRERGE AQAIVRSSAL TDSAWSAIIA AERRAGEQRS ELQVESRELA TRAAALERTN RARAPLARIG EIDAELEALG DIKLFPADAA SRLNAAIANR NTAQELQNQH SIQLDRAKNV LSSITLPELL LAERERAEAL EERRPVVEKA VADIARRTGE LERSEARIET ARSEARLPAG AALPSAGWRK RAREYLQDRR ALAERRVRLS LALSEAALAK AKAETDLAAL PPPIELAGLT DAITAVPADF AERVTSAEER LIRAERRMQI ERASLSPWAG EIDGLGTMSL PVDVVVSEHQ ARIEVANAQL AQAKLAISNS SEASVKATAR LAGLSAAGDL PTPEAVLAAR ELRDSAVEDV RGRLARPREP GDEDAGVALS LAVERADAVA DRRDAEADRI AELLLARTTS AEADAFHQAN RLLVEEAEAA LEEAKADWAS LLAPLGLVLP PAALAAWRAS RERVLEAFEE QAAAKTGLDR LKATAAAALT KLAQISSAAG FQIEAEMELA DAVRAAKARL SALEVADRLR AAANVVMAGV ATTLDELARE EREIVSRGAV LDEDRGALMV EAGLLEDAGD PAISDAIEAT EAVAAEIATA DGLRRQINGM KKDIDAFEAD ANTLFAAVGH DAPTRHSEDV HALTLTLKAG LAEKLKVERA REDIIAAQAG IQESEARAAA ANAVVAELLG IGDITEEAAL LPAIATSTHS IALGTARQTA LNDLVEISGG RSVEELTADV AVIGADEATA ELEAIADRQH EIGAEREAIG KVLRESELAH DNAATETLAA DAQQRVKEIE AALLDAAERH VGAAATAAML RWLIGKHRAE SQGPLIARAG SLFQEMTHGS FAGLGLDYGA DDQPRMVGLR QGGERVGVDG MSEGTRDQLY LALRLASIDE RAAGGMPFIC DDILITADEP RSASMLSALG AISRRTQVIV FTHHEHIVDL ARRTLGDDGF TLHRLDAEIA VIAAA
|
| |