| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1770 |
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| Symbol | |
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| ID | 6332044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1830043 |
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| End bp | 1830966 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642658043 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001931919 |
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| Protein GI | 188997668 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAATT TTATGGTAGA ACCACCAAAT ATAGACTTTT TAAAGATTAG AAAAATAGGC
TATGGGATAT CTTTAAGCTT GTTAATTTTA AGCTTTGTTT TATTCTTTAC GAAAGGGTTT
AATCTTGGGC TTGATTTTAC AGGTGGAACG TCGATTCAAG TTAAATTTAA CCAGCAGATA
AGAGTTTCTG ATATTAGAAA TCTACTTAAA GATGTAGATT TAGCAGACTC TTTAATTCAA
GAAGTAGGAA CTAACAAAGA TGAAGTCGAA ATTAGAGTAC CGGCTAAAAA GGGAAGTTCA
AGCGTTGTTC TTGAAAAAGT GAAAAAAGCA TTAGATAGCA AATACCAAGG TCAGTATGAG
ATAAGAAAGG TAGAGTTTAT AGATGCTTTG GTTGGAAGTG AGATGGCAAA AGCCAGCGTG
TACTCTATGG TTTTTGTAAT GCTTGGGATT TTACTTTTTG TAGGTTATAG ATATGAGCCT
TTATTTGCAA TTGCAGCTGT AATTCCCCTG TTCCATGATG CAATCATCAC ACTTGGTATA
TTCTCACTTC TTGGAAAAGA GATAGACCTT ACAGTAATTG CGGCAATCTT AACAGTTCTT
GGGTACTCTT TAAACGATAC AATCATCGTT TTTGATAGAA TCAGAGAAAA CATAAAAGCC
CGTGGAAGAA AAAATATGGA AAGCATCATT AACAGAAGTA TTAACGAAAA CTTAGCAAGA
ACGATAATCA CATCAGGAAC AGCATTATTT TCTGTAATTG CGATATACTT TTTTGGTGGA
GAATCTCTTC AAAACTTCGC ATTAGCACTG CTTATAGGTA TTGTTTTTGG TACTTACTCA
TCAATTTACG TTGCTGCACC TTTGATTTTA GAAGTTGAAA AAATTTTAAG AGCAAAAGCA
AAAAAAGAAA CGGTAGGAGC GTAA
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| Protein sequence | MRNFMVEPPN IDFLKIRKIG YGISLSLLIL SFVLFFTKGF NLGLDFTGGT SIQVKFNQQI
RVSDIRNLLK DVDLADSLIQ EVGTNKDEVE IRVPAKKGSS SVVLEKVKKA LDSKYQGQYE
IRKVEFIDAL VGSEMAKASV YSMVFVMLGI LLFVGYRYEP LFAIAAVIPL FHDAIITLGI
FSLLGKEIDL TVIAAILTVL GYSLNDTIIV FDRIRENIKA RGRKNMESII NRSINENLAR
TIITSGTALF SVIAIYFFGG ESLQNFALAL LIGIVFGTYS SIYVAAPLIL EVEKILRAKA
KKETVGA
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