| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1749 |
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| Symbol | |
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| ID | 6332693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1809017 |
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| End bp | 1810393 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642658024 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001931900 |
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| Protein GI | 188997649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGGA AGATTGTTTT GGCAACACTA ACTGCTATTT CTGTTAGCTA TGCTAAGGAT
TTAACACTAC AAGAAGCTAT AGAAACAGGA TTAAAGAACA ACTATGAAGT AAAAGCAACA
GAAAATCTTT TAAAGTCTAA AGAATATCAA TATGAATCTG CCAAAGGAAT GAGACTTCCA
AGTTTAACAT TTTCAGAAAT GTTTATGAGA ACAAACGAGC CGGGCTTTGC AATGTGGAAC
ACTATGAGCC AAAAGAAGCT TGATTTTATG ACTTCTTCAA AATTTGTTGA TATGACAGCT
ATGAATCCTA TGTTTTCTAA ACCATCATAT CCGGAAGTAA ACGCATGGAA AACAAAGCTT
GAGCTTCAAC TTCCAATATA TACAGGTGGA AAATTATCAT CTGGAATAGA TATGCAGAAA
AAAGATTATG AAGCAACAAA AAAAGATTTG GTAAGAGCAA AAGAAAAGGC TATCTATGAC
ATATCAAAAG CTTACTATGG AGCTTTACTT GCAAAAGAAG CAATTGACCT TGCAAATCAG
GCATATAAAG ATGCTGAAAA GCATTACAAC ACAGCTGTTA GCATGGTAAA AAATGGTCTT
GCTATACCGG CAGATGAATT GAGAGCAAAA GTTTATTTGT CTGATATGAA GTCAAAAATA
AAAGAAGCAG AAAACAATTA CTTAGTAGCA AAAAGAGGAC TGCTTTTAGC AATGGGCTTG
GATAAAGTAG ACCCATCAGA AATAGATGTA GTAGGGCATC TTCAATGCGA AACTATAAAT
GGTTCTGTGG AAGATTATCA AAATTATGCA CTATCTCACA GGTCAGACCT TATTGCTATC
AGAGAAAAAG TTAAAATTGC AGAAAAGATG ATAGAGTTTA ACAAAGCAGA TATGCTTCCA
ACAGTTGGAG CGTTTGCATC TTATGAATTA AACGATGGTA AATGGATGCT TGGGAACGAA
GGGAAATGGT GGATGGCAGG CGTTGCTCTA AACTGGAAAA TATTTGATGG TTTTCAATCT
TTCAATAAAT ATAAAAGTGC AAAAGAAACT TATAATCAGT ATAAACAACA AGAAAAAGGA
TTTGAAGAGT TTATAAAATT TAGCGTGTAT AAAGCTTACA AAGACAATCA AACAGAGCAG
GAAAAATTAA AGACTGCTGA GGAAAATTTA AAGTACGCGC AAGAGATTTT AAAAATAACA
GAAGTAAGAT ATAAAAATCA GCTTGCATCT ATGATTGATT TACTTGATAC ACAAACAATG
TATGACAAAA TAAAGTTTGA CAAGGCACAA GCAGAGTATA ACTGCCAATT GTCAGTATTA
GAACTAAAAT ATCAAACTGG AAAATTAATT GAAGAAAATC AAAAGAGAGG AGAGTAA
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| Protein sequence | MKRKIVLATL TAISVSYAKD LTLQEAIETG LKNNYEVKAT ENLLKSKEYQ YESAKGMRLP
SLTFSEMFMR TNEPGFAMWN TMSQKKLDFM TSSKFVDMTA MNPMFSKPSY PEVNAWKTKL
ELQLPIYTGG KLSSGIDMQK KDYEATKKDL VRAKEKAIYD ISKAYYGALL AKEAIDLANQ
AYKDAEKHYN TAVSMVKNGL AIPADELRAK VYLSDMKSKI KEAENNYLVA KRGLLLAMGL
DKVDPSEIDV VGHLQCETIN GSVEDYQNYA LSHRSDLIAI REKVKIAEKM IEFNKADMLP
TVGAFASYEL NDGKWMLGNE GKWWMAGVAL NWKIFDGFQS FNKYKSAKET YNQYKQQEKG
FEEFIKFSVY KAYKDNQTEQ EKLKTAEENL KYAQEILKIT EVRYKNQLAS MIDLLDTQTM
YDKIKFDKAQ AEYNCQLSVL ELKYQTGKLI EENQKRGE
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