Gene SYO3AOP1_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1717 
Symbol 
ID6331441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand+ 
Start bp1778453 
End bp1779058 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content28% 
IMG OID642657991 
Productregulatory protein MerR 
Protein accessionYP_001931868 
Protein GI188997617 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.212526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA TCGGTCAGTT TTCAAAGCTT ACAGGTATTT CAATATCTAC TTTAAGATTG 
TGGGATAAAA AAGGAATATT AAAGCCTGAA TTTAAAACAC CACGTGGAGA AAGAAGATAT 
AGCGAAGCTC AATTGCAGTA TATTCTTCAA AAGAAATCAG ATGCACCACG TATTAATGTT 
GGCTATGCAA GAGTAAGTTC AAAGAAACAA GAAGATGATT TAAAAAGACA AATTGAATTA 
TTAGAATTGT TTTTAGCAAA ACAAGGCAAG CCTTTTAAAA TAATAAGCGA TATGGGAAGT 
GGAATAAATT ATTCAAAATC AGGATTAAAA GAACTGTTAA AACTGATATC ATCAAATCAA 
GTAGATACAA TTTATGTTTT ATACAAAGAT AGGCTTGTTA GATTTGGTTT TGAGTTAATA 
GAAGAATTTG CAAAACTTCA TAACACAAAA ATTGAAATAA TGAATCAAAC GGAAGATAAA 
ATAGATGAAG AAGAATTGGT AGAAGATATT TTAAACATAA TCCATGTTTT TTCTCGTAAA 
TTAAACGGTA AAAAAAGTCA TATAAACAAG AAAATAGCTC AAAGGCTTTT AGATGAAAAA 
CAGTAA
 
Protein sequence
MYKIGQFSKL TGISISTLRL WDKKGILKPE FKTPRGERRY SEAQLQYILQ KKSDAPRINV 
GYARVSSKKQ EDDLKRQIEL LELFLAKQGK PFKIISDMGS GINYSKSGLK ELLKLISSNQ 
VDTIYVLYKD RLVRFGFELI EEFAKLHNTK IEIMNQTEDK IDEEELVEDI LNIIHVFSRK 
LNGKKSHINK KIAQRLLDEK Q