| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1693 |
|---|
| Symbol | |
|---|
| ID | 6331926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1752668 |
|---|
| End bp | 1754080 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642657968 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_001931845 |
|---|
| Protein GI | 188997594 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTC TAAAGGATTT GCCCTTCCTG CCTTATGATG AGGATGCAGA AAGGGCAATC
CTTGGAAGTT TAATCGTTTA CCCAGAAATC ACAGACTCAG TCCTTACCAA GCTAAAAATT
GATGATTTTT ATCTTCAAAA ACATAAAATC ATTTATGAAA CTATTATTGA TTTATTCAAC
CAAGGTAAAC CTTTAGAAAT AATCATTTTA AAAGATGGAT TAGAAAAAAA AGGAAAATTA
GAATTTGTAG GAGGAATAAG TTATTTATAC CAACTTTCCG AAGAAAGCGT TCCGCCTGAT
ATAGCGTTTC AGATTGTTGA TATTATCAAA GAAAAATCCG TTTTAAGGTC TTTAATAGAA
TCTGCACAAA AGATAATTGC CAAAGCAAAA AATAAAGAAT CTGATATTAA CAGTTTATTA
GAGGAAGCAG AAAGTATAAT TTTTCAAGTA ACAGAAAATA AAGAAGTAGT AAATTATTAC
AGCCTTGGAG AAGTTTTAAA AGAGACTTTA AAAATAATTA ATGAGCTTTC AAAAAAAGAA
ACAGTAGTCA CAGGAATACC AACAGGATTT TATGATTTAG ACAGATTAAC CACCGGATTT
CACCCGGGTG ATTTAGTCAT AATCGCTGCA AGACCGGGTA TGGGAAAAAC AAGCTTTGCG
TTATCAATTT TACATCATTT ATCCGTTGTA GACGAAGTTC CGTCTGCATT TTTCTCATTA
GAAATGTCAA GACAACAAAT TGCAATGAGA CTTCTTGGAG AAGAATCTAA AATTCCACTT
AAAAAAATAA GGTCTGGATT TTTAAATGAA AGCGAGATTG AAAAATTAAC AGAAGTTGCA
CTAAAAATGA TAAATGCACC ATTGCATATA GATGATACTG CCTCTTTATC TATCTTAGAT
TTAAAAGCAA AGGCAAGAAG GTTAAAGAAA GAAAAAGATA TCAAGATAAT CGTTATTGAC
TATCTACAAT TACTTCGTTC TCATAGAAGA GTAGAAAATA GACAGCAGGA GGTAGCAGAA
ATATCAAGAG GGTTAAAGGC TTTAGCAAAA GAGCTTGGAA TTCCTGTTGT AGCTTTGGCA
CAGCTTTCAA GGCAAGCAGA AATGCGAGCG GACAAAAGAC CACAGCTTGC AGACTTAAGA
GAATCTGGTA GTATTGAGCA AGACGCAGAC CTTGTTTTAT TCATACATAG ACCTGAGTAT
TACAAGAAAA ATCCTTCACC ACAAGAAGAA GGTTTAGCGG AGATAATAAT TGCAAAACAA
AGAAACGGAC CAACCGGCAC AGTTCATTTA GCATTCATCA AAGAAATAAC TAAATTTGAA
AATTTAGCTA AAACAAGTCA TAATATAGAA GAAGATATTT ATGAAGAAGA GCAGGAATTT
ATAGAAGAGT CTGAAGACGG AGTAGATTTT TAA
|
|---|
| Protein sequence | METLKDLPFL PYDEDAERAI LGSLIVYPEI TDSVLTKLKI DDFYLQKHKI IYETIIDLFN
QGKPLEIIIL KDGLEKKGKL EFVGGISYLY QLSEESVPPD IAFQIVDIIK EKSVLRSLIE
SAQKIIAKAK NKESDINSLL EEAESIIFQV TENKEVVNYY SLGEVLKETL KIINELSKKE
TVVTGIPTGF YDLDRLTTGF HPGDLVIIAA RPGMGKTSFA LSILHHLSVV DEVPSAFFSL
EMSRQQIAMR LLGEESKIPL KKIRSGFLNE SEIEKLTEVA LKMINAPLHI DDTASLSILD
LKAKARRLKK EKDIKIIVID YLQLLRSHRR VENRQQEVAE ISRGLKALAK ELGIPVVALA
QLSRQAEMRA DKRPQLADLR ESGSIEQDAD LVLFIHRPEY YKKNPSPQEE GLAEIIIAKQ
RNGPTGTVHL AFIKEITKFE NLAKTSHNIE EDIYEEEQEF IEESEDGVDF
|
|---|
| |