Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1548 |
Symbol | |
ID | 6331847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1590582 |
End bp | 1591466 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642657823 |
Product | periplasmic solute binding protein |
Protein accession | YP_001931700 |
Protein GI | 188997449 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000077382 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTTC TATCGTTTTT ATTAATTTTA TTAACATTTG GATTTGCAGA AGCAGAAATT AAAGTAGTAG CAACATATCC ATACATAGCA AGCATCACAA AGGAGATTGT AAAAGAGAAA GCACAGGTAG ACTATTTAGC TTCTGGAAAC TTAGACCCTC ACTTTATCGT TCCAAAGCCA TCTTTAACTG TAAAGCTTAG AAACGCGGAT TTATTAATCA TCAATGGAGC TGGTCTTGAA GTTGGCTGGC TTCCACCGCT TTTAAACCAA GCAAACAACA GAAAAATTAA CCCTGGTTCA AATGGATTTT TAGACTTATC TCAGTATATT AATCTGATAG AAAAACTGGA GAACGTATCA AGAGTAATGG GAGACGTACA TCCGGAGGGA AACCCCCACT TTCACTTAGA CCCATACAAT GTGTTGATTA TCTCGCAAAC TATTACAGAA AAACTATGCA AACTTGACAG TTCAAACTGT GATTATTACA AAAATAATCT ATCTGACTTT AAGAAAAGAT GGAATGAAAA ATTAGCCGTT TGGAATTCAA AAATGGCAAA CTTGAAAGGA GTAAAAGTTT ATCAGTATCA TAAGCTGTTT GATTATTTCT TAAAAAGATA TGGCATTATC TCTGTAGACA CGATAGAGCC ATTACCCGGA ATACCCCCAA CAGCAAAGCA TTTAGAAGAG CTAATCTCAA AAGCAAAATC TGAAAATGTG AAGATGATTT TACAAGATGT TTACCATCCT ATCAAACCTG CAAAATACTT ATCAGAAAAG ACAGGTTTAA AAATTGTAGT CCTTCCTCAT GACGTTGGAA CAGTGGAAGA GGCAAAGGAT ATATTCTCTT TATTTGATAC AATCGTTGAA AGGATGAATA AATGA
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Protein sequence | MRVLSFLLIL LTFGFAEAEI KVVATYPYIA SITKEIVKEK AQVDYLASGN LDPHFIVPKP SLTVKLRNAD LLIINGAGLE VGWLPPLLNQ ANNRKINPGS NGFLDLSQYI NLIEKLENVS RVMGDVHPEG NPHFHLDPYN VLIISQTITE KLCKLDSSNC DYYKNNLSDF KKRWNEKLAV WNSKMANLKG VKVYQYHKLF DYFLKRYGII SVDTIEPLPG IPPTAKHLEE LISKAKSENV KMILQDVYHP IKPAKYLSEK TGLKIVVLPH DVGTVEEAKD IFSLFDTIVE RMNK
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