| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1494 |
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| Symbol | |
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| ID | 6332290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1539562 |
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| End bp | 1540461 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657772 |
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| Product | 5'-3' exonuclease |
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| Protein accession | YP_001931650 |
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| Protein GI | 188997399 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.32691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AAGTTTTATT AATAGACGGC TCATCTTATT TGTACAGAGC ATACTATGCA
CTGCCACCTC TAACTGCTCC GGATGGAAGA CCAACAGGTG CAGTGTATGG CTTTATAAGA
ATGCTTTTAA AAACATTATC AGTCTTTAAC ACTCCATACG TAGCCGTTGC ATTTGACCTT
CCCGGAAAAA CTCTTCGCCA TGAAAAATTC AGTGAGTATA AAGCAACAAG AAAAGAGACT
CCTGACCCAT TGAAACAACA AATCCCAATA TTAAAAGAAA TAATCCAGCT TCTTGGAATA
AAAATTCTTG AAATACCCGG CTATGAAGCT GACGATATCA TCGCTACATT GTCAAAAAAA
GCAGAAAAAG AAGGCTACGA AGCTATTATA GTTACCCCTG ACAAAGATAT GAACCAGCTA
ATTTCAGACA ATATAAAAAT CTTTAATCCA GTAAAAGAAG AGCTTTTAGA TAAAGAAAAA
ATCAAAGAAA AATACGGAAT CCATCCACAG CAGTTTATAG ACTATCTTAC AATGATTGGC
GATGCTGTAG ATAATATTCC CGGTATAAAA GGAATTGGTC CAAAGACTGC TGCTGCTTTA
CTGCAAGAAT TTGGAAGTTT AGAGAATATA TTAGAAAATG TAGATAAATT AAAAGGTAAA
TTAAAAGAAT CTTTCAAAGA ATTAGACAAA GAGCAGCTTC AAAGAATGAA AGAAATAATA
AAATTAGATG CCAACATTGA GATAAATATA AAAATAGAAG ACCTAAAAAA ATCAAAACCA
GACTTAGAAA AGCTAAAACA AATCTTTCAA GAATTAGGAT TTAAATCATT GTTAAAAGAT
GTAGAAAAAA GTAATTTAAA AATTAAAGAA GATAAGATAG AACAAAAGAG TTTATTCTGA
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| Protein sequence | MKNKVLLIDG SSYLYRAYYA LPPLTAPDGR PTGAVYGFIR MLLKTLSVFN TPYVAVAFDL
PGKTLRHEKF SEYKATRKET PDPLKQQIPI LKEIIQLLGI KILEIPGYEA DDIIATLSKK
AEKEGYEAII VTPDKDMNQL ISDNIKIFNP VKEELLDKEK IKEKYGIHPQ QFIDYLTMIG
DAVDNIPGIK GIGPKTAAAL LQEFGSLENI LENVDKLKGK LKESFKELDK EQLQRMKEII
KLDANIEINI KIEDLKKSKP DLEKLKQIFQ ELGFKSLLKD VEKSNLKIKE DKIEQKSLF
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