Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1407 |
Symbol | |
ID | 6332182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1448779 |
End bp | 1449933 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642657687 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_001931566 |
Protein GI | 188997315 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000685892 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTGCTCTTAT TACTGGTATA ACTGGACAAG ATGGGTCTTA TTTGGCCGAA TTTTTATTAT CAAAAGATTA TGAAATTCAT GGTATCATTA GAAGAAGTTC AACCTTTAAC ACACAAAGAA TAGACCATAT CTATGTTGAC CCTCACGACC CAAACGCAAG GTTATTTTTA CATTATGGCG ACCTTTCTGA CCCTGGAGTC CTTACTGAAA TAATTTGGAA AATAAAACCA GATGAAATTT ACCATCTTGG AGCTCAATCT CACGTTAAAG TGTCATTTGA TATGCCTGAA TACACAGGAG ATATCACAGG ACTTGGAACA ACAAGACTCC TTGAAGCCAT TAGAAGAAGC GGAGTAAAGG CAAAATTTTA TCAAGCTTCT TCCTCAGAGA TGTTTGGAGC TGCCCCTTCT CCTCAGAACG AAAATACAAT CTTTTATCCA AGAAGTCCTT ATGCAGCTGC AAAAGTTTAT GCTTACTGGA TGACAGTGAA TTATAGAGAA GCTTATAACC TTTTTGCTTG TAATGGTATT TTGTTTAACC ATGAAAGCCC AAGAAGAGGA GAAACATTCG TTACCAGAAA GATAACAAGA GCTCTAGCTA ACATTATAGC TGGTAAGCAA AAAATTCTAT ATCTTGGGAA CCTTTATGCA AAAAGAGACT GGGGCTATGC TCCTGAATAT GTAAAAATGA TGTGGTTAAT GCTTCAACAA GACGATCCAG ATGATTATGT AGTTGGAACG GGGGAAAGCC ATACGGTTAA AGAATTTGTA AATTTTGCAT TTAGTTATGC AGGGATAGAG CTTGAATGGA GAGGCGAAGG TATAGAAGAA AAAGGTATTG TTAAATCTGT TGAATCAAAT CTTACTAATC ATGTTAAACC AGGGGATATT GTGATCGAAA TAGACCCAAG GTATTTTAGA CCAACAGAGG TTGAATTTTT ACAAGCAGAT ATAGCAAAAG CTAAGCAAAA ACTTGGCTGG GAGCCGGTAG TAAAATTTGA GCATTTAGTT AAAATTATGG TAGACTATGA CCTTCTCCAA AATGGAATAA AGCCAAAAGG AGAAGGGATA AAAATTTCCA AAGAGCTTGG TTATGGTTGG ACTAATCATG AATACTCTTT CTATGAAAAA CTACGTGAAA GATAG
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Protein sequence | MKKIALITGI TGQDGSYLAE FLLSKDYEIH GIIRRSSTFN TQRIDHIYVD PHDPNARLFL HYGDLSDPGV LTEIIWKIKP DEIYHLGAQS HVKVSFDMPE YTGDITGLGT TRLLEAIRRS GVKAKFYQAS SSEMFGAAPS PQNENTIFYP RSPYAAAKVY AYWMTVNYRE AYNLFACNGI LFNHESPRRG ETFVTRKITR ALANIIAGKQ KILYLGNLYA KRDWGYAPEY VKMMWLMLQQ DDPDDYVVGT GESHTVKEFV NFAFSYAGIE LEWRGEGIEE KGIVKSVESN LTNHVKPGDI VIEIDPRYFR PTEVEFLQAD IAKAKQKLGW EPVVKFEHLV KIMVDYDLLQ NGIKPKGEGI KISKELGYGW TNHEYSFYEK LRER
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