| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1002 |
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| Symbol | |
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| ID | 6332208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1038910 |
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| End bp | 1040070 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657290 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001931175 |
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| Protein GI | 188996924 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03537] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAGG CAATAAAAAA TCTTAAAAAT TATCCTATGG AAGAGTTAAA TAAAATTAAA
GCATCGCTAA AAGAAAGAGG AATAAAAATT TATGATTTTG GAACAGGTGA CCCAAAAGAA
CCAACGCCAG AAATAATAAG AAATGCAATT AAAAATGCAA TTCCGGAAGT TAGCCAGTAT
CCATCAGTTG CCGGAAGAAA AGAACTAAGA GATACAATTT CAAAATGGTT TGAAAATAGA
TTTTCTGTAA AACTAAATTC AGATACGCAA ATAATACCAT CGGCAGGCTC CAAGGAAGCA
ATTTTTCATT TTCCGTTGGT TTTTATAGAC CCGGAGGAAG ATAAAAAAAG AGTCATCTTT
GGAACGCCGG CATATCCAGT ATACGAAAGA GGAACGTTGT ATGCAGGAGG GATTCCAACG
CCTATAAAAC TAAAAGAAGA AGACGGTTTT TTACTCAGAC TTGATAAAAT TGATAAAGAA
ATACTAAAAG AGACAAAGAT TGTATGGATA AACTATCCAC ACAACCCAAC CGGAGCAGTA
GCACCTGCAA GCTATTTTGA AGAAACTATA AAAATTTGTC AAGAATATAA TATTATTTTA
TGTTCTGATG AATGTTATAC AGAAATATAT TTTGAAGAAA AACCACATTC AGCTTTACAA
TTTGGCATGG ATAATGTTGT AGTTTTTCAT TCTTTATCAA AAAGAAGTGG TATGACTGGT
TACAGGTCTG GGTTTGTTGC CGGAGATGAA AAGATTATAA GCTTTTATAA AAAAGAAAGG
GCAAATTTTG GCGTTGCAAG TCCAGATTTT ATTCAAATGG CAGCTAAGAC AGCATGGGAA
GACGAAAGCC ATGTAATTGA AAGAAACAAA ATTTTTAGAG AGAAGAGAGA TTTATTTTTA
GAATTCTTAA ATAAAAAAGG TTTTGAATAT CTGTATCCAA AAGCCACTTT TTATATTTGG
ATTAAAGCTC CAAACGGAAT CTCTTCAAAA GATTATGCAA AGATTTTGTT AGAAAATGGT
ATTATAGTTT CTATCGGAGA AAATTTCTGT AGTAGCACAG AGATAAACGA AGGAACCTGC
GAAAGTCAAT ATTTTAGAAT TGCATTAGTT CCAACCATTG AAGAATGTAA AGAAGCGTTA
AAAATTTGGG AGAGTATATA A
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| Protein sequence | MNKAIKNLKN YPMEELNKIK ASLKERGIKI YDFGTGDPKE PTPEIIRNAI KNAIPEVSQY
PSVAGRKELR DTISKWFENR FSVKLNSDTQ IIPSAGSKEA IFHFPLVFID PEEDKKRVIF
GTPAYPVYER GTLYAGGIPT PIKLKEEDGF LLRLDKIDKE ILKETKIVWI NYPHNPTGAV
APASYFEETI KICQEYNIIL CSDECYTEIY FEEKPHSALQ FGMDNVVVFH SLSKRSGMTG
YRSGFVAGDE KIISFYKKER ANFGVASPDF IQMAAKTAWE DESHVIERNK IFREKRDLFL
EFLNKKGFEY LYPKATFYIW IKAPNGISSK DYAKILLENG IIVSIGENFC SSTEINEGTC
ESQYFRIALV PTIEECKEAL KIWESI
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