| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0961 |
|---|
| Symbol | |
|---|
| ID | 6332729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 992969 |
|---|
| End bp | 995644 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642657252 |
|---|
| Product | SMC domain protein |
|---|
| Protein accession | YP_001931138 |
|---|
| Protein GI | 188996887 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000356641 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATTGA AAAAGATTGT TCTAAAAAAC TTTTTAATAC ATGAAGATAC TCAATTAGAA
TTTTCTCCAA ATGGTATAAC TGCAATTATT GGTGAAAATG GGTCAGGGAA AAGTTCAATC
ATTGAAGCTA TTCAATTTGC GTTTTTTGGA GATTCAGATA AAGGAAATCT TAAAGACTTA
ATTAAATGGG GAAGAAGACA GGCAAAGGTA GAGCTTGAAT TTGAAACAAA AGATGGACTT
TATAAAGTAA TAAAAGAGAT AAATAAAACA GGAAAAAATG TAAATACAAA TTCAGAAATT
TTTATATATG AAAATGGCAG ATTTAGACCG TATTATCAAA AAGAGGTAAA TAAAATTCTT
CCAAAAATAA CAAGACTGAC TAAAAAAACA TTTTTTACAT CGGTCTTAAT AAAACAAGGT
GAAATAGAAG GGATTCTTAG AGAAAAGCCA TCTGAAAGAA AAAAAATCAT AGAAGACCTT
TTAAACATAA ATCTTTACAG AAAAATTCAA GAACAGTTTA AAGAAAATCA AAAAAGAGTA
AAAACAAGGT TAGATATCTT GCAGGAAGAT ATTTTAAAAA CTGACAAAAT TCAGATTCAG
CAATATCTTG AAGAATTAAA CAATCAATTA GAGATTTTAT TAAAAAATTA CGAAGGCCTA
AACCAAAAGC TAAATAATAT CAAGCAAAAA TTAAAAGAAA TAGAAGACCA AGAAAAACAA
GCTTCATACT TACAATCAGA AATTGGAAAG TTAGAAGAAA GTATAAAAAA CATAAAAGCA
AATATTGAAA ATTATGAAAA TCAGCTGAAA GAGATTGAAA GTTTAAAGGC TAAGTTTTCA
GAATTAGAAA GTAAATTTAA CCAACTTGAA AATCTTGAAA AGAAAAGTCA GATTCTAAGC
CAAATAGAAA AGTTAATCAT TACAAAAGAA AGCAAAGAAG AATCAATCAA ACAGCTTGAA
GAAGATTTAA AATTTTTAGA AAGCTATAAA GACAAAGCTA AAGAGTTTGA AGAGAAACAA
AACTCTTTAA AGCAAATTGA ATCAAAATTG GCTGAAATAA ACCAAATTAA AGGTGAAATC
TCACAGCTAA ACAAACAAAT TGAGAAGATA AATTCAGATA TCCAAAAAAA GAAACAAGAA
TATATGGCAA TTGTAGATGA CCTGACTAAG ATATATCAAA AATTCCAGAC TCTAAAACTA
AATCCTTTAA TGATAAAAGA ATATAAAGAA GCTAATAAAT TAAAACTTCA GCAGTTAGAA
AAAGAGATAA AAGAGTTGGA AGATAAATTA AGCCAAGTTA GAACTGAAGG TAAGGCTTTA
AGAGAAAGTT TAGAAAGTAT CCAGAAGCTG GAAGGAAAAT GTCCAACCTG TCTAAGACCA
ATCGAAGAAC ATCAAAAAGA AGAGCTAATT AAAGAGCTTG AACAAGCAAT TGAAATAAAA
AGAAAAGAGT ATAAAGAGTT AGACGAAAAA CTAAAATCTT CAAAAGAAGA AAAGGAAAAG
CAAGATAAAA TAAAAGAGTT ATTAACCGAA TTAGAGCCAA TTTATAAATC AATAAAAGAA
AAAGAAGACG AATTAAAGCA AGCAAGAGAA AAATTTAACA TTTTTACTCA TAAGCTAAAA
AATGAAGAAA ATTTGAGGAA ACAGAAAGAA GAAATTGACC AGTTTATAAA AGAACATCAA
AAAGATTATG GATTTTTTAA AAATCTACAA TCAAAAAATA TTCAAAAAAG CTATGAAAAC
CTAAATAAAG AAATTAAAGA ACTTTCAGAG AAGATAAACA ACCTATTAAA ACAAATAGAT
TTTTCTGCAT CGTCAAAAGA AGAGATTGAA ATTAAGCTAA GAGAAACAAA AGAGAAAATT
GAAGAATTAA AGCCGTATAG AGAAGAGTAT TTAAAAGCAA AGCAAGAAAT TGAAGAAGAG
AGTAAAATTA AAGAAAACAT AAAAAAATTT GAAGCAGAGC TTGAAAATAA AAATAAAAAA
CTCTTAGAAC TAAGAGAAAA GTTAGATAAA ATAGAGTTAG ACAAGCTATT AAAAGAAAAA
GAATTTCTTA AAGAAAAAGA AGATAATTAT CAAAAAGAGC TTTTAGAACT ATCCGGAAAA
ATAGGTAGCT TGAAGAATGA AATTAATAAT TATGAAAAAT CTATCGAAGA GCTAAAAAAT
AAAGAGCAAG AGATAGAAAC TTTGAAAATA AAGCTTGAGA AATACAGCAA AGCTATAGAA
TCTATAGATT ATGTATGCAA AGTGCTTGAA GAAAAGGCAT TATACTTACT ACCTAAGTAT
ACAGAAGAGC TTTTTGAAAA GTTTGGATTT ACTCAATTTT CAAGACTAAG ATTTACAGAA
AAATATGATA TTATCTTTGA TGCTTTAGAG GTCGGAGCAA GTAATATAGA GGTTTCCAGT
GAAGCTTTAA GCGGTGGACA AAGAATAGCA CTTGCAATAG CGTTAAGATT GGCAATAGCA
AGACTTTTTA ATGAAAAGAC AGACTTTTTA ATCTTAGATG AGCCAACAAT TCATTTAGAC
CAAGAAAGAA AGAGGGAGCT TATAGATTTA CTTGGAGACT TTAAAGAAAA AAATTTTTTA
AAACAGCTAA TAGTTATAAC TCACGATGAG GAGGTAGAAG ATAGAGCTGA TTTAATATAT
AAAGTTAATA AAGGTAGAGT GGAGGTGGTA GAATGA
|
|---|
| Protein sequence | MILKKIVLKN FLIHEDTQLE FSPNGITAII GENGSGKSSI IEAIQFAFFG DSDKGNLKDL
IKWGRRQAKV ELEFETKDGL YKVIKEINKT GKNVNTNSEI FIYENGRFRP YYQKEVNKIL
PKITRLTKKT FFTSVLIKQG EIEGILREKP SERKKIIEDL LNINLYRKIQ EQFKENQKRV
KTRLDILQED ILKTDKIQIQ QYLEELNNQL EILLKNYEGL NQKLNNIKQK LKEIEDQEKQ
ASYLQSEIGK LEESIKNIKA NIENYENQLK EIESLKAKFS ELESKFNQLE NLEKKSQILS
QIEKLIITKE SKEESIKQLE EDLKFLESYK DKAKEFEEKQ NSLKQIESKL AEINQIKGEI
SQLNKQIEKI NSDIQKKKQE YMAIVDDLTK IYQKFQTLKL NPLMIKEYKE ANKLKLQQLE
KEIKELEDKL SQVRTEGKAL RESLESIQKL EGKCPTCLRP IEEHQKEELI KELEQAIEIK
RKEYKELDEK LKSSKEEKEK QDKIKELLTE LEPIYKSIKE KEDELKQARE KFNIFTHKLK
NEENLRKQKE EIDQFIKEHQ KDYGFFKNLQ SKNIQKSYEN LNKEIKELSE KINNLLKQID
FSASSKEEIE IKLRETKEKI EELKPYREEY LKAKQEIEEE SKIKENIKKF EAELENKNKK
LLELREKLDK IELDKLLKEK EFLKEKEDNY QKELLELSGK IGSLKNEINN YEKSIEELKN
KEQEIETLKI KLEKYSKAIE SIDYVCKVLE EKALYLLPKY TEELFEKFGF TQFSRLRFTE
KYDIIFDALE VGASNIEVSS EALSGGQRIA LAIALRLAIA RLFNEKTDFL ILDEPTIHLD
QERKRELIDL LGDFKEKNFL KQLIVITHDE EVEDRADLIY KVNKGRVEVV E
|
|---|
| |