Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0643 |
Symbol | |
ID | 6332627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 663628 |
End bp | 664281 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642656928 |
Product | phosphoribosylglycinamide formyltransferase |
Protein accession | YP_001930833 |
Protein GI | 188996582 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000104742 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA ATTTAGTAGT TCTTATATCC GGAAGAGGAA GCAATCTAAA AGCCATCTTA GAAGCTATAA AATCCGGGAA GATAAATGCT AAGGTATCTT TAGTTTTGTC AAACAAAAAA GATGCAAAAG GGCTTGAAAT AGCAAAAGAG TATGGCATAA AAACAAAATT TATAGACCCA TCATTTTTTG AAACAAGAAG GGGATACGAC ATATACATAG CAGAATTAAT TAAAAAAGAA AATCCGGACT TTGTGGTTTT AGCCGGATAT ATGAGAATCT TGTCAGATGA GTTTATAGAT GCTTTTGAAG GTAAAATTGT AAATATACAT CCTTCTTTAG TTCCGGCTTT TCAAGGTAAA AGCGCACAAA GACAAGCCTT AGATTATGGC TCTTTAATAA CCGGATGTTC TGTTCATTTT GTAACTAAAG AACTTGACAA TGGACCCGTA ATAGTTCAAG CGGTTGTTCC AGTTTTACCG GAGGACACAG AAGAGAGTTT ATCCAATAGA ATTTTAGAGT TTGAACATAA AATTTATCCA CAGGCTATTA AATGGTTAGT TGAAGATAGA GTGGTAGTAA GTGGTAGAAA AGTAATTGTA AAGGATGCAA AATATGGCAC TTTACCAGTC AATCCATCTC TTGAAGATTT TTAA
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Protein sequence | MSKNLVVLIS GRGSNLKAIL EAIKSGKINA KVSLVLSNKK DAKGLEIAKE YGIKTKFIDP SFFETRRGYD IYIAELIKKE NPDFVVLAGY MRILSDEFID AFEGKIVNIH PSLVPAFQGK SAQRQALDYG SLITGCSVHF VTKELDNGPV IVQAVVPVLP EDTEESLSNR ILEFEHKIYP QAIKWLVEDR VVVSGRKVIV KDAKYGTLPV NPSLEDF
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