Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0541 |
Symbol | |
ID | 6332248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 558489 |
End bp | 559409 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656829 |
Product | aspartate carbamoyltransferase |
Protein accession | YP_001930735 |
Protein GI | 188996484 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000499557 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATT TAATCTCTAT TGACCAGCTT AATCAAGAAG ACATAGAGAA CATTTTTAAA ATTGCCAAAG AATACAAGGA GAGATTTAAA AACGGAGAAA AAAAGTTTAA TGATTTAAGA GGATACTCTG TTTTACTTGT ATTTTTTGAA AATTCAACAA GGACAAGAAC ATCTTTTGAA CTTGCCGGAA AGATTCTTGG GGCAGATACA ATAAACATTT CAGCATCTTC AAGTTCTGTA AAGAAGGGCG AGACGCTTTA TGATACTGTG AAAACCTTAG AAGCAATGAA CGCAGATTTT ATAGTGATTA GGCATTATAT GTCCGGTGCG GCTAACATAG TTGCTAAGTC TGTAAAATCT CATGTAATAA ATGCAGGAGA CGGGACTTAT CAACATCCAT CCCAAGCATT GCTTGATGCT TTTACTATCG TAGAAAAAAA AGGAACTTTG GCCGGATTAA AGATAGCAAT CATTGGAGAT ATTCTTCATA GTAGAGTGGC AAGGTCTGAT ATAAAACTTT TTAAAAAGCT TGGCGGAGAA ATTACAGTAT GCGGACCTAT AACAATGCTA CCAAGACATG CAGAAGTATT GGGTGCAGAC TACATAACAA CAGACATTGA AGATGCTATA AAAGATAAAG ATGTAGTTAT CTTTTTGAGA ATTCAGCTTG AAAGACAGGA TAAACCATTT TTCTCAAGCT TGAGAGAATA TTCCATAAAG TATGGATTAA ATCAGGAAAG ATTAAACAAA ATGAAAGAAG ATGCAGTTAT CATGCATCCC GGACCTGTAA ACAGAGGAAT TGAAATCCAA AGTGAGCTTG TCTATGGAGA TAGAAGTTTA ATCTTAGACC AAGTTGAAAA TGGATTATTT GTTAGAATGG CTATTTACAA ATATCTAAAG GATTTAGAGG GTAAGGTATA A
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Protein sequence | MKDLISIDQL NQEDIENIFK IAKEYKERFK NGEKKFNDLR GYSVLLVFFE NSTRTRTSFE LAGKILGADT INISASSSSV KKGETLYDTV KTLEAMNADF IVIRHYMSGA ANIVAKSVKS HVINAGDGTY QHPSQALLDA FTIVEKKGTL AGLKIAIIGD ILHSRVARSD IKLFKKLGGE ITVCGPITML PRHAEVLGAD YITTDIEDAI KDKDVVIFLR IQLERQDKPF FSSLREYSIK YGLNQERLNK MKEDAVIMHP GPVNRGIEIQ SELVYGDRSL ILDQVENGLF VRMAIYKYLK DLEGKV
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