| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0461 |
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| Symbol | |
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| ID | 6331031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 474627 |
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| End bp | 476297 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642656750 |
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| Product | cytochrome d1 heme region |
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| Protein accession | YP_001930656 |
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| Protein GI | 188996405 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00181768 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTATC CTGCTGCTGC TGTACTTTTA AACCTTCTAT TTTTTTTCCT CTCCCCTGTC
GTGGGGGAGG AAACTTATAA TAAATATTGT GCATCTTGCC ATCATCCTCA AAAAATTGGG
ATTACGGCAC CACCGCTTCT CCCAATGACA TTATCTAAAT ATACAGATGA AGAGCTTACA
AAAATAATAA AAAATGGGCT TTCATCCACA CAGATGCCTT CTTTTGGAAA TCTTAAAGAT
GAAGAAATAA AAAGCATCAT AAGGTTTCTA AGAGAGGACA TACCTATAAA CTGGAGTATT
AAAGAGATAA GATCTTCCTT AACATTAAAT AACAATATTC AAAAAAAAGT ACTGAATATA
AAAAACATTA AAAATATAAC TTTTGTTGTA GAAAGAGGGC ATAATAAAAT ATGGATTATG
GAAAATGAGG ATATATTGGA TGCTTTTGAT TTTTCAAACG TTCATGGAGG GATAAAATAT
ACTTTAGATG GTAAAAATTT TTATATTCCT TCAAGAGATG GGTGGATAGG CTATTATAAG
ATTAACAATA AAAAAGAAGG TTATTACGTA GGAAAAATAA GAGCATGTAT CAATCTTAGA
AACATATCTT TGTCAAAAAA TGGGAACTAT CTCATCGTAT CCTGTCTTCT TCCACAAACA
TTAGAAATAC TTAACGCTAA AACATTAGAA CCAATTAAAG AAATTCAATT AGATGGAAAG
ATTTCAGCTA TCTATGAATT ATATAAATCA GATAAAGCCA TATTTACTTT TAGAGATAAA
CCTATCATAG GAATATTGAA CACGAAAGAT TTAAGTATTA ATTACATAAA AGCAGAAGAA
CCAATAGAAG ATTTCTTTAT AGATCCTTTT GATAAATTTC TAATTGGTAC TTCTCGGAAG
GATAAAAAGC TTGTTGTTTA TGAATTAGAA AAATTTAAAT TAGTTTTTGA AGATAAGATG
GACAGTATGC CACATTTATT CTCTGCTGCA TTTTGGTATA AAAACGGTAA ATTTTATTTT
GCCACTCCAC ATATTGGAAA ACCGTATATT TCTATTTGGC AGATGTATGA TTGGAAATTT
ATAAAAAATG TAGAGATAGG TTCTCCGGGA TTTTTTGTTA AAACTCATCC ATCAACAGAT
TATCTATGGG TTGATAACGG CTCTGATGCT GTGGTTTTAA TCAATAAGAA CGATTTTTCA
GAAAAATTTA TGACTATAGT AAAAGGAAAA AAATTTACCC ATACAGAATT TAATGGTAAT
GGAAATATCG CATACTTAAG CATTTACGAT AATGATGGAT ATTTAATTTT GTATGATACT
AAGAAGCTTC AAGAAATAAA AAGATATCCT GCAAGCTATC CAGTGGGAAA ATACAACTTT
GTTAACAAAG AAAGAAGTTT TTATCCATCT TTATTTGGAG AAGAGATATT TAAAGAAAAA
TGCTGGGGAT GTCATCATCA AACACAGGAA GCATTTGGTC CATCGTTTAA GTACATTGCA
AATAATAGAA CAGAATCTCA AATCATAGCT CAGATACTTG ACCCAAAAAA TAGTTATAAA
CTTCTTGGAT ATAAAAGAAA TTCTATGCCT GCTTTTAATT TTAATGAGTA CGAAATAGAG
AGTATAGTTA ATTATATAAA ATCCTTTAGA GAGGATAAAA ATGATAGATG A
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| Protein sequence | MLYPAAAVLL NLLFFFLSPV VGEETYNKYC ASCHHPQKIG ITAPPLLPMT LSKYTDEELT
KIIKNGLSST QMPSFGNLKD EEIKSIIRFL REDIPINWSI KEIRSSLTLN NNIQKKVLNI
KNIKNITFVV ERGHNKIWIM ENEDILDAFD FSNVHGGIKY TLDGKNFYIP SRDGWIGYYK
INNKKEGYYV GKIRACINLR NISLSKNGNY LIVSCLLPQT LEILNAKTLE PIKEIQLDGK
ISAIYELYKS DKAIFTFRDK PIIGILNTKD LSINYIKAEE PIEDFFIDPF DKFLIGTSRK
DKKLVVYELE KFKLVFEDKM DSMPHLFSAA FWYKNGKFYF ATPHIGKPYI SIWQMYDWKF
IKNVEIGSPG FFVKTHPSTD YLWVDNGSDA VVLINKNDFS EKFMTIVKGK KFTHTEFNGN
GNIAYLSIYD NDGYLILYDT KKLQEIKRYP ASYPVGKYNF VNKERSFYPS LFGEEIFKEK
CWGCHHQTQE AFGPSFKYIA NNRTESQIIA QILDPKNSYK LLGYKRNSMP AFNFNEYEIE
SIVNYIKSFR EDKNDR
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