Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0366 |
Symbol | |
ID | 6332349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 383010 |
End bp | 384020 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642656656 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001930564 |
Protein GI | 188996313 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000710908 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTC TTGATAAGTA TCTGATAAAG TTATTTTTTA AAAACTTTAT ACTGCTTATC GGACTATTTT CACTGATCAT AACATCTTCT CAGCTTTTGC ATCTTCCATC TTTTGCCTAC AGTATGAATA TAATAGACTT TTCAAAGCTG CTGTTTTTGA TAGACATATC TTTTATAAAA TATCAACTTC TTTTTGCTTT TTTTATAAGT TGGCTACTTG TTGGGATATC TTTAAGAGAC AAAAATGAAA TCTACGCTGT GTACTCTGCC GGCATATCAA AAAAACAGCT CTTAAAACCT GTTTTTATCA TGACTGTTAT TTTTGTAATC ATTGCGTTTG TTTTTTCTAC GGTTATAGTC CCATCAGCAA ACAGAGAAAG ATATAAATTT TTAACGTATA AAGTCAAAAG CTACATTTTA GAAAATGTTT CTCCAAAAAA CTTTTCTAAG ATAAACGACA ATGTCTCTGT ATACGTTGAA AAGAAGGAAA AAAACACTTT TTATAATATC TTGATTTATA ATGCTTCTAA CGGCTATCTT ATCACAGCCA AAGAAGGTAT GTTTATATCA AACAACCTAA TTTTAAAAGA TGGCTACATA CAGCTACCAT CCGAAAAATC CTTTGACACA ATAAAGTACG AAAAATATAC ATTTAGCTTG GATGTTTCTT ACATAAAAGA GATTTCTATG CAAGATTTTA GAACAAAAGA TTTATTAAAA CTTGCCGTTG AAGAAGATAG TAAAGTTTTA TCTATTTTAG CTGATAGATT TTATTTTGTA ATACCTTTTA TGTTTTTAGG ATTTATTGGT TTTTTATCAG GAATAAATAC CTATCGTTCA AAAGAAACCC TTTTAACCTT TGCCGTCAGC CTGTCTATTG GCTATATGGT ATTAAACTAC TACTTTTTAA AAATCATTGA AAAAATGCCT GCATTGTTTT TTGTTTATCC AATTCTGTTG ATAGTTATTT TTTACTTGGT TTATAAGCTT CAAGAAAAAG ATAAAAAGTA G
|
Protein sequence | MKILDKYLIK LFFKNFILLI GLFSLIITSS QLLHLPSFAY SMNIIDFSKL LFLIDISFIK YQLLFAFFIS WLLVGISLRD KNEIYAVYSA GISKKQLLKP VFIMTVIFVI IAFVFSTVIV PSANRERYKF LTYKVKSYIL ENVSPKNFSK INDNVSVYVE KKEKNTFYNI LIYNASNGYL ITAKEGMFIS NNLILKDGYI QLPSEKSFDT IKYEKYTFSL DVSYIKEISM QDFRTKDLLK LAVEEDSKVL SILADRFYFV IPFMFLGFIG FLSGINTYRS KETLLTFAVS LSIGYMVLNY YFLKIIEKMP ALFFVYPILL IVIFYLVYKL QEKDKK
|
| |