Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0319 |
Symbol | trpA |
ID | 6331520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 326878 |
End bp | 327642 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656604 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001930518 |
Protein GI | 188996267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAGGAA AAGTATTTGA GATTAAAAAA CCGCTTATTT GCTACTTTAT GGCAGGATAT CCATCTGTTG AAGACAGTAT CAAGACAGCA GAAGTTTTAT TAGAAAATGG TGCCGATATT TTAGAAGTTG GATTTCCTTT TTCAGACCCG GTTGCTGATG GCATTACAAT CCAAGCAGCC CACGAAAAAG CTGTAAAAGA TGGTATTACA CCGGTTAAAG TCTTTGAAAT TACAAAAACT ATAAAAGAAA GATTTCCGGA CAAACCACTT ATCGCAATGA CATATTACAA CCCAATTTTT AAAATGGGAG AAGAAAATTT TTGCAAGATA GCAAAAGAAA ATGGTGTTGA CGGATTGATC GTTCCAGATT TACCACCGGA AGAGGGAGAA AGCTTAAAAA AAATAGCAAA TCAGTATGGA TTATCTGTGA TCTTTCTGCT TGCTCCAACA TCACATGAAA AAAGGATTAA ACTTGTTTCA AACATGAGTG ATGATTTTAT ATATTACGTA TCAATTACAG GAATTACAGG GGAAAGAGAA AGTTTGCCAT GGCAAGAACT CAAAAACAAA GTAGAAGAGA TTAAGAAAAT GACAGATACA AAAATTGCTG TTGGATTTGG TGTTTCAAAG GGAGAACATG CTAAAATTAT ATCAAGTTTT GCAGATGGTG TTATAGTTGG AAGTGCGATA GTAAAATTAC AAGGTAAAAA AGATTTTGAA GGATTAAAAT CTTTGGTGAA GGAGCTACAT GATAGCATTA GTTGA
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Protein sequence | MIGKVFEIKK PLICYFMAGY PSVEDSIKTA EVLLENGADI LEVGFPFSDP VADGITIQAA HEKAVKDGIT PVKVFEITKT IKERFPDKPL IAMTYYNPIF KMGEENFCKI AKENGVDGLI VPDLPPEEGE SLKKIANQYG LSVIFLLAPT SHEKRIKLVS NMSDDFIYYV SITGITGERE SLPWQELKNK VEEIKKMTDT KIAVGFGVSK GEHAKIISSF ADGVIVGSAI VKLQGKKDFE GLKSLVKELH DSIS
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