| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0171 |
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| Symbol | |
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| ID | 6331369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 186950 |
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| End bp | 187810 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656449 |
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| Product | Diaminopimelate epimerase |
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| Protein accession | YP_001930370 |
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| Protein GI | 188996119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 69 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGAAAA ATAACTTTTT TGTCAAATCA CATGGACTTG GTAATGATTA CATCGTCTTG
GACTCAGATA AAATAGATTT TAAGCTAACA CAAGGTTTGA TAAAAAAAAT CTGCGATGTT
CACTACGGGA TAGGAAGCGA TGGGATTTTA GTTAAATACG ATTCAGATGT AGCGGATTTT
AAGCTAAGGA TTTTCAATCC GGATGGTAGC GAAGCAGAGA AAAGCGGAAA CGGACTTAGA
ATTTTCTGTA AATTTCTTTA TGATTATGGC TATACAGACA ACGAAGAGTT TACAGTTGAA
ACAAAAGGTG GTATTGTAAA AGCAAAAATA GAAGAAAAAA ATAAATTTGG CAAGGCAAAA
ATTATAACCG TTGATATGGG AAAGGCTATT TTTAACGCAA AACAAATTCC AATCAATACA
GACAAAGAAG AGTTTATATC AGAAAAAATC ACGGTTGGAG ATAAAGAGTT TGAAGTTAAC
TGTGTATCTG TTGGAAATCC TCACTGTGTA ATCATAAAAG AAAACCTTGA TGAAGAAGAG
ATTAAAAAGT ATGGACCAAT GATAGAAAAT CATCCACTTT TTCCAAACAG GATAAACGTT
CAGTTTGTTA AGCCTATAAG TAGAAATGAA GCACAGATTT TAATATGGGA AAGGGGGGCG
GGATTTACTT ATGCCTCGGG AAGTTCTTCG TGCGGGGTTG CATCTGTGCT TGTTAAAAAA
GGTCTTGCAG ATAGAGAAAT TAAGATTAAA ATGATTGGTG GCGAGCTTAA AATTAGCATA
GATGAAGATT GGAATATTAA AATGACCGGA GAAGTTCAAG AAATTTGCAG TGGCTACATC
AGTAGAGAGT TTTTAGAATG A
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| Protein sequence | MEKNNFFVKS HGLGNDYIVL DSDKIDFKLT QGLIKKICDV HYGIGSDGIL VKYDSDVADF
KLRIFNPDGS EAEKSGNGLR IFCKFLYDYG YTDNEEFTVE TKGGIVKAKI EEKNKFGKAK
IITVDMGKAI FNAKQIPINT DKEEFISEKI TVGDKEFEVN CVSVGNPHCV IIKENLDEEE
IKKYGPMIEN HPLFPNRINV QFVKPISRNE AQILIWERGA GFTYASGSSS CGVASVLVKK
GLADREIKIK MIGGELKISI DEDWNIKMTG EVQEICSGYI SREFLE
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