Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0041 |
Symbol | |
ID | 6331769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 49565 |
End bp | 51085 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642656319 |
Product | Peptidoglycan-binding domain 1 protein |
Protein accession | YP_001930244 |
Protein GI | 188995993 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0945132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCATAA AAAGATTACT ATTAATTAAA ACTTTACTAC TGCTTATATT TAATACCAGC AAAGCCTATC CTGTCGAGCT GGTTGATTTA AAAACATACT TAAAGAATGA TAAAAGTTTA AAAAGTTTAT ATCAATTTAC TAATTTTTCA CCGATTTGGA TAAACGATAG TTTTGAAGAA AAAACTGAAA AACTTAGAAA TCTAATAGAA GTGTTGGATA AAGAAGGTTT AAATCCATCA AACTACAACT TCTTCTTAAG CAGAAATCCT GTAAAAGATG AGATTGAACT ATCAAAACTC ACTTTAAAAA TTTGCTTAGA CCTTTATAAT GGAACTATAA ATCCTAAAGA AATTTTTAGA ACTTGGAACT TACCAAAGAA AAAATTTAAC AAATATAAAG AACTTGCCAA TATTATCAAA GAAAATCAAT TAGAAAACTT GCCTGAACTC TGTCAACCAA ATTACGATGG TTATTTAGCA TTAAAAAAAT ATTTATCAAA ATACCATGAA ATCATAGCAT CAAATCCATA TTTACCAAAG ATAAATAAAA AATTAAAACC GAAAACAAAA GATAAAGAAG TCAAAAAATT AAGACAGCTT TTGTATATCT ATGGTTTTTA TAACGGAAAC ACAAATTCTG ATGTATATGA CGATGAACTT TTGGAATCGG TAAAGAGATT TCAAGAAAGT AGAAACTTAG AAGCAGACGG AATAATAGGC GTCAAAACAT TAAGCGAATT AAACAGACCT CTTAATGAAT TAATTGATAT TATTAAAATC AACATGGAAA AATACAGATG GTTGCCTGAA AATTTAGCTG AAAATAGGAT AGAAATTAAT ATTCCTTCAT TTGAACTAAA ATATTACGAA AATGATATAG AAGTATTAAG TACAGAGGTT ATTGTTGGAA AAAATTATGA AGAAGATTTT AGACCAACAC CTATATACTA CGGTAAAATT GAGAAAATTA CGTTAAATCC ATACTGGTAT GTACCTAAGA AAATTGCAGC AAAAGATATT CTTAAAAAGA TAAAGTCTAA TCCAAGATTT TTAGAAGATT TTGGTTTTAA AGTTTTTTAT AACGGTCAAG AAGTTGATTA TAAAAAGATA AATTGGCGTA AATATAATGA AAGTAATTTT AACTTTACTT TGATACAAAG TCCCGGTGAT AAAAACTTTT TAGGAAGAAT AAGAATAACA TTTTCAAACC CATTTCAAGT TTATTTACAT GATACTCCAT TCAAAGAATT GTTCAAACAG AAAAGAAGAG CATTTAGTTC TGGTTGTATA AGAATCAATG ATGCTTTGTC TTTAACTTCG TATATCTTAA ACAAAGATAA AAATGAAATA GTAAATTTTA TAAATAGTAA TAAAACACTT GATTTAGTTC CTTCAAAAAA TATTTATGTT TATATTTTTT ATTTCACAGC ATTAGTAAAA AATGATACAA TATATTTTTA TGAAGATTTG TATAATTTTG ATAAAAAGAT TTTAAATTTA ATGTTGGATA TTGATGAATA G
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Protein sequence | MLIKRLLLIK TLLLLIFNTS KAYPVELVDL KTYLKNDKSL KSLYQFTNFS PIWINDSFEE KTEKLRNLIE VLDKEGLNPS NYNFFLSRNP VKDEIELSKL TLKICLDLYN GTINPKEIFR TWNLPKKKFN KYKELANIIK ENQLENLPEL CQPNYDGYLA LKKYLSKYHE IIASNPYLPK INKKLKPKTK DKEVKKLRQL LYIYGFYNGN TNSDVYDDEL LESVKRFQES RNLEADGIIG VKTLSELNRP LNELIDIIKI NMEKYRWLPE NLAENRIEIN IPSFELKYYE NDIEVLSTEV IVGKNYEEDF RPTPIYYGKI EKITLNPYWY VPKKIAAKDI LKKIKSNPRF LEDFGFKVFY NGQEVDYKKI NWRKYNESNF NFTLIQSPGD KNFLGRIRIT FSNPFQVYLH DTPFKELFKQ KRRAFSSGCI RINDALSLTS YILNKDKNEI VNFINSNKTL DLVPSKNIYV YIFYFTALVK NDTIYFYEDL YNFDKKILNL MLDIDE
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