| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1652 |
|---|
| Symbol | |
|---|
| ID | 4437713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1539443 |
|---|
| End bp | 1540810 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639677244 |
|---|
| Product | lactococcin A ABC transporter permease protein |
|---|
| Protein accession | YP_820993 |
|---|
| Protein GI | 116628374 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01000] bacteriocin secretion accessory protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAC AGTTGTTTAA AAGCACAGAG TTTTACCATC GTCGCTACCA CAATATGTCT
ACTGTTTTGA TTACTCCCTT GATTTTGTTA GTTATTTTCC TTTTTCTTTT CGCTTTTTTT
GCTAAGAAGG AAGTTACAGT CACGTCTAGA GGAAGTATAG AGCCAACCAA GGTTATCGCA
GTAATCCAAT CAACCAGTGA CAATACCATC ATAGATAATC AACTGGTTGC TAATAAGGTT
GTTAAAAAAG GGGACACCTT AGTTCAGTAT TCAGAGACCA TGGAGGCATC GCAAAAAGAG
GGGCTTCAAA AGCAACTAGA ACTTTTAAAA AGACAGGAAT CAGGTTTGAA GACCTTGCAA
TCTAGCCTAA CGCAGGGAAC CAATCTTTTC CAAGAACAGG AAGACGAGTT TGGTTATCAG
AGTACTTTTA ACACCTACCT AAGTCAGGCA CAGGATATTG ACTTGGGTGT GGCTAAAACA
AATACAGAGG TTAATAACCA AGCAGCAATT GCGAGTAATA CCGGTTCTGC TATTGATAAC
CAGATTAGTC AATTGCAGAC TCAGGTCTCA GAGTATGAGG CGCTCTCTCA AGCTATTACC
AATCATGAAA CGACTTTACC TGAAGGCAAT CCTCATCAGG CAACCTTAAA TGCCTATAAC
AGTCAGTATG CTACGACACC GGATGCCAGT GTAACAGACC AATACCTATC TCAAGTTAAT
ACCAATATTT CGAGCTTGAA TGCTTCCATA GGTAATCTAG AAATCCAAAA GGCTGGGACA
GGCACAGTTG TAACTTATGA CAATAGTGAT AGCACTAAAA AAGAAGCTCT AAAAAATCAA
TTCTTGCAAA ATGCAGGACA GCAATTGAGC TCAGTGGAAA CACAAATTAA CGATACCGAG
AGTAAAATCA ATCAGGCAGA TGTCCTTCTG ACTAATACCC TCATCCAGTC ACCAGAAGAT
GGAATCTTAC ACTTGAGTCA AGCTGATAAA AAAGCAACCA TGGCTGCGAC AGGAACTGAG
TTGGCCCAGC TTTATCCCGA TATGACTCAA ACCCAGGAAG TTGCCATTAC TTATTATGTG
AATTCGGATT ATGTGCCAAA ACTGCAAAAA GGCCAGTCAG TTCGACTGAC CTTGGATAAG
GTTGGTAATC ACGGTACCAC AATTATTGGA AAACTTGAGA GTATTGATAA TTCTGCCACG
GAAACAGAAA GGGGGAATGT GTTTAGAGTA ACTGCTAGGG CAAGTATTTC AGAAAAAGAA
GCCCAAAATC TACGTTACGG TCTAGAAGGT CGTGTGACAA GCGTTATTGA CCAAAAGACC
TACTTCAATT ACTTTAAAGA CAAGTTACTA AACTTGCAAG ACCAATAG
|
|---|
| Protein sequence | MNPQLFKSTE FYHRRYHNMS TVLITPLILL VIFLFLFAFF AKKEVTVTSR GSIEPTKVIA
VIQSTSDNTI IDNQLVANKV VKKGDTLVQY SETMEASQKE GLQKQLELLK RQESGLKTLQ
SSLTQGTNLF QEQEDEFGYQ STFNTYLSQA QDIDLGVAKT NTEVNNQAAI ASNTGSAIDN
QISQLQTQVS EYEALSQAIT NHETTLPEGN PHQATLNAYN SQYATTPDAS VTDQYLSQVN
TNISSLNASI GNLEIQKAGT GTVVTYDNSD STKKEALKNQ FLQNAGQQLS SVETQINDTE
SKINQADVLL TNTLIQSPED GILHLSQADK KATMAATGTE LAQLYPDMTQ TQEVAITYYV
NSDYVPKLQK GQSVRLTLDK VGNHGTTIIG KLESIDNSAT ETERGNVFRV TARASISEKE
AQNLRYGLEG RVTSVIDQKT YFNYFKDKLL NLQDQ
|
|---|
| |