Gene STER_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1443 
Symbol 
ID4437986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1350830 
End bp1352089 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content30% 
IMG OID639677050 
Productpolysaccharides export protein 
Protein accessionYP_820801 
Protein GI116628182 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.466456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAG TAACTGCCCA AAAGGTATTT TTCTGGAATA TTTTAGGAAG TATGTCTTCA 
GCTGCTGTTT CAGTTATACT TCTTTTTATT GTTACACGTG CTTTAAATAG TGCTTCAGCG
GATACCTATA GTTTTGCCTA TGCGATTGCG AATCTCTTTG TTATTGTAGC AAGTTTTCAA
GTTAGAGATT TCCAAGCGAC AGATATAAGA GAGAAGTATT CTTTTGATAC TTATTTCGTA
ACAAGGATTA TTTCAAACGT TGCAATGGTT CTTCTTTTAG TGATGTATTT AATTTTTAAT
ACAAATACTC ACTCAAATCT AGGGATAATT TTTTGGGTAT CTTTTTTCCG TGTTAGTGAA
GCTTTATCGG ATGTTTTTCA AGGATTATTT CAGCAGAAGG AACGTTTGGA TATTGCCGGA
AAATCACTGT TTTTGAGAAA TACTATTTCA ACAATTGTAT TTGCTTTAAC TCTAGTTATC
TCAAAAAATC TATTGTGGTC TGTTATTTCA CAAACTATTA GTTCATTTGT TTTTATTGCT
CTATTCGATT ACCCTCATTC AAAATTTTTC CATCGCTTAA ATCTTAAGAG TGTTAAGCCG
AGTAATATTA TCAATGTATT GAAAGATTGC TTACCTTTAT TTATTAATGC TTTTTTGCTG
GTTTCAATTT ATAACCAACC TAAATATGCA TTGAATGATA TTTTTAACCA GGGACTAATT
GGTAACGGTG TTCAGAGGGA TTTTAGTATT TTGTTTACCC CTATTTTTGC CATGAATCTG
ATGATTGTCT TTCTAAGACC AATGATTACC CAACTTGCAG TCTTTTTAGA AGAAAAGAAG
ATTTCTCATT TTGTCACTTA CAAGAATAAT CTCTTCAAGA TTTTATTTGG AACTTGTATA
TTAATATTTC TAATTGGTGC TTTTATAGCT ATCCCAGCTT TGGATATTGT ATATGGGACT
AATCTTAAAC AGTATCAAAC TAGTTTTGTT GTTTTATTGC TTGGAGGAAT TGCAAGTACT
TTTTCAACTG TATGTGATAA CATTTTGACA ATATTTAGGA AACAACATTT TTTAGTTATT
TCCTTTATTG TAGGCTATAT TGTGTCAATC TTAACTGCCA AGCCTCTAGT GTCGAAATTT
GAAATTTTTG GAGCCTCATT ATCATTTCTT TGTGCGATGA TAGCATGGCT ACTTGCTTCT
CTAGTAATTT ATTTTGTAAC AAATCCATAT ATAATCTTTA GAAGGAAAAA AATAAAATGA
 
Protein sequence
MKKVTAQKVF FWNILGSMSS AAVSVILLFI VTRALNSASA DTYSFAYAIA NLFVIVASFQ 
VRDFQATDIR EKYSFDTYFV TRIISNVAMV LLLVMYLIFN TNTHSNLGII FWVSFFRVSE
ALSDVFQGLF QQKERLDIAG KSLFLRNTIS TIVFALTLVI SKNLLWSVIS QTISSFVFIA
LFDYPHSKFF HRLNLKSVKP SNIINVLKDC LPLFINAFLL VSIYNQPKYA LNDIFNQGLI
GNGVQRDFSI LFTPIFAMNL MIVFLRPMIT QLAVFLEEKK ISHFVTYKNN LFKILFGTCI
LIFLIGAFIA IPALDIVYGT NLKQYQTSFV VLLLGGIAST FSTVCDNILT IFRKQHFLVI
SFIVGYIVSI LTAKPLVSKF EIFGASLSFL CAMIAWLLAS LVIYFVTNPY IIFRRKKIK