Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1239 |
Symbol | |
ID | 4436955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 1143548 |
End bp | 1144630 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639676870 |
Product | superfamily II DNA/RNA helicase |
Protein accession | YP_820623 |
Protein GI | 116628004 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.604047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAAAA ACTTTCCTGA ACAATGGCAA AACCTCCTTA AAGAAAAAGG AATCACGACA GAAACTGCCA TTCAAAAAGA ACTATTTACA CCAATTACTG AAGGGGAGAA TATCTTAGGT ATCAGTCCAA CTGGGACAGG TAAGACCCTA GCCTACCTTT TCCCACTTCT TCTCTCTCTT AAGCCCAAAA AAGCTCAGCA ACTGCTTATC CTAGCACCTA ACTCTGAACT TGCTGGACAA ATTTTTGATG TAACCAAACA ATGGGCTGAA CCTCTAGGAA TCACTGCCCA ACTCTTCCTT TCTGGCTCTA GTCAAAAACG CCAAATTGAA CGTCTGAAAA AAGGACCAGA GATTCTTATT GGAACTCCAG GTCGTGTCTT TGAGTTGATT AAACTCAAAA AAATCAAAAT GATGAACGTC AATACCATTG TTCTCGATGA ATTTGACGAG CTTCTCAGTG ATAGCCAATA TCACTTCGTA ACAAAAATCA GCCACCATGT CCCTCGTAAC CACCAAATGA TTTACATTTC AGCAACCAAC AAAATTGATA GTCAAGATCT TGTCGAAAAT ACTATCGTTT ATGACCTATC TAATCAGGAA CTAGACACCA TCAAACATTA TTACATCAGC GTTGATAAAC GTAATCGTGT CGAACTTCTT CGTAAGTTCT CCAATATCCC TAATTTCCGT GGTCTTGTCT TTTTCAATAG CCTTTCTGAT CTTGGTGCTA CTGAAGAACG TCTCCAATTT AACGGAGCTT CAGCTGTATC CCTAGCTAGT GACATTAACG TCAAATTCCG TAAGGTTATT CTAGAAAAAT TTAAAAATCA CGAGATCTCA CTCTTATTAG GGACTGATCT CTTAGCACGA GGTATTGATA TTGAAAACCT TGAAGTAGTC ATCAACTTTG ATATTCCTCG AGACCGTGAA GCCTACACTC ACCGTTCAGG ACGTACTGGC CGTATGGGAA ATGAAGGTAG GGTGATTAGC TTGGTATCAC ATCCAGAAGA TCTCAAAAAG CTTAAAAAAT TCGCTAAAGT TTCAGAAATA GTTCTTAAAA ATCAAGAAAT TCACGAAAAA TAA
|
Protein sequence | MFKNFPEQWQ NLLKEKGITT ETAIQKELFT PITEGENILG ISPTGTGKTL AYLFPLLLSL KPKKAQQLLI LAPNSELAGQ IFDVTKQWAE PLGITAQLFL SGSSQKRQIE RLKKGPEILI GTPGRVFELI KLKKIKMMNV NTIVLDEFDE LLSDSQYHFV TKISHHVPRN HQMIYISATN KIDSQDLVEN TIVYDLSNQE LDTIKHYYIS VDKRNRVELL RKFSNIPNFR GLVFFNSLSD LGATEERLQF NGASAVSLAS DINVKFRKVI LEKFKNHEIS LLLGTDLLAR GIDIENLEVV INFDIPRDRE AYTHRSGRTG RMGNEGRVIS LVSHPEDLKK LKKFAKVSEI VLKNQEIHEK
|
| |