| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1000 |
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| Symbol | truB |
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| ID | 4438457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 922860 |
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| End bp | 923702 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639676652 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_820406 |
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| Protein GI | 116627787 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.263341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTC ATGATGCTGT TTTTAAACTA CGCAAAATAT TACATGAGAA AAAAATTGGG
CACGGCGGAA CTCTTGATCC AGATGTTACT GGTGTTCTAC CTATAGCAGT TGGAAAAGCT
ACTCGTGTTA TTGAATACAT GACTGAAGCG GGTAAAGTCT ATGAAGGCGA AATCACTATT
GGATTTTCGA CAACTACCGA AGATGCTAGT GGAGAAGTCG TCCAAACAAC TCCAATAACA
GAGCTAGATG GAGCAACTGT CGATCAGGCG ATGGCTAGTT TTGAGGGAGA AATCACACAA
ATTCCTCCTA TGTATTCAGC GGTTAAGATC AACGGAAAGA AACTTTATGA GTACGCCCGA
GCTGGAGAAG AAGTTGAACG TCCTCAACGT CAGGTGAAAA TTACCGAGTT TGTCCGAACC
TCACCTATTG AGCTAGAAAA CGGTACTGCA AGATTCACCT TCCGTGTTGC TTGTAGTAAA
GGAACTTATG TCCGCACCTT ATCTGTTGAT TTGGGTGTAA AACTAGGCTT TGCTAGTCAT
ATGTCTGCTC TGCGTCGAAC AGCTTCTGCA GGTTTAACAT TAGATTCATC CCTAACTCTG
TCACAAATTT CTGAAATGGT AGAAGCAGGA GACCAGTCCT TCCTACTCCC TATTGAATTT
GGCGTTCAGG ACCTGCCAGC CGTACAAGTC ACTGAAGATG ATGCCAAAGA AATCTCATTT
GGTCGCTTTA TTTCAATTAA TAGCCAAGAG CCTTTGGTTG CTGCCTTTTT GGGCGACAAA
GTTCTAGCTA TTATGGAAAA GCGAGGTCAA GTCTATAAAC CTAGAAAAGT ATTAAGTCAA
TGA
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| Protein sequence | MTSHDAVFKL RKILHEKKIG HGGTLDPDVT GVLPIAVGKA TRVIEYMTEA GKVYEGEITI
GFSTTTEDAS GEVVQTTPIT ELDGATVDQA MASFEGEITQ IPPMYSAVKI NGKKLYEYAR
AGEEVERPQR QVKITEFVRT SPIELENGTA RFTFRVACSK GTYVRTLSVD LGVKLGFASH
MSALRRTASA GLTLDSSLTL SQISEMVEAG DQSFLLPIEF GVQDLPAVQV TEDDAKEISF
GRFISINSQE PLVAAFLGDK VLAIMEKRGQ VYKPRKVLSQ
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