| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0920 |
|---|
| Symbol | rnhB |
|---|
| ID | 4437212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 849832 |
|---|
| End bp | 850599 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639676587 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_820341 |
|---|
| Protein GI | 116627722 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACAA TTAAAGAAGT CAAGGAACAA TTGGCTATTT TGAGGGATCT TGACGACCCT
AGATGGGCAA GTTTTGAGGA AGATAGTCGG ACTGGTGTAC AAGCTGCCAT TAGGAAACGC
CGTAAGGCTA TCCTCGCTGA ACTTGCTGAG GAAGAACGTT TAGAAACGCT TCTTAATTAT
GAGAAATCAC TCTATGCTCG AGGAATAGAA CTCATCGCAG GTGTCGATGA AGTTGGACGT
GGTCCTTTAG CTGGGCCAGT TGTAGCGGCT GCGGTCATTT TACCAAAGCT TTGCAAAATA
AAAGGTCTAA ATGACAGTAA AAAGATTCCA AAATCTAAAC ATGAAGCTAT CTATAATCAG
GTAATGAAGG AGGCAGTAGC TGTCGGTATT GGTATTAAGG ATAATTATGT GATTGATGAC
GTCAATATTT ATGAAGCTAC CAAGTTAGCC ATGATAGAAG CTATTGAAAA ACTCAATCCC
CAACCTGAAC ATTTGCTAAT TGATGCCATG AATTTGGACT TACCTATAGA ACAAACCTCA
ATCATAAAAG GGGATGCTAA TTCTCTATCT ATTGCAGCAG CTTCTATCGT AGCAAAAGTA
ACTCGGGATA AGATGATGGC TGATTATGAG CAGGAGTTTC CTGGATACGC CTTTGCCAAA
AATGCAGGCT ATGGCACCAA AGAACATTTG TCTGGCATAG ATAAGTTTGG TGTCACGCCA
ATTCATAGAA GAAGCTTCGA ACCAATAAAG TCAATAATAA AAAAGTAG
|
|---|
| Protein sequence | MATIKEVKEQ LAILRDLDDP RWASFEEDSR TGVQAAIRKR RKAILAELAE EERLETLLNY
EKSLYARGIE LIAGVDEVGR GPLAGPVVAA AVILPKLCKI KGLNDSKKIP KSKHEAIYNQ
VMKEAVAVGI GIKDNYVIDD VNIYEATKLA MIEAIEKLNP QPEHLLIDAM NLDLPIEQTS
IIKGDANSLS IAAASIVAKV TRDKMMADYE QEFPGYAFAK NAGYGTKEHL SGIDKFGVTP
IHRRSFEPIK SIIKK
|
|---|
| |