Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0761 |
Symbol | holA |
ID | 4438334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 694548 |
End bp | 695582 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639676456 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_820210 |
Protein GI | 116627591 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCTA TGGAAACGAT TGAAAAGCTG AGCAGAGAAA AACTTCCTAA GATAACTGTC TTGGCTGGCG AGGATTTAGG TCAGTATAGT CAAGCTAAAG AAAAATTTTT AAAACAAATT GGATTTGATT CAAGCGACTT GACCTATTCC TATTTTGATA TGTCCGAGAC TGATTATCAG GATGCTGAAC TCGATTTGGA AAGTATGCCT TTTTTTGCAG ATGAAAAGGT AGTTATTTTT GATCATTTCG CAGATATGAC GACTGCTAAA AAGTCTTATC TAGATGAAAA AGCATTGAAA CGTCTTGAAA ATTATCTTCA ATCACCTGTA GAAACAACAC GTCTTGTATT AATGGCTTCT GGAAAGCTCG ATGGGAAGCG TCGGTTGGTT AAACTCCTAA AACGTGATGC TTTGGTACTT GAAGCTAACT CTTTAAAGGA TACAGAGCTT AGAACTTATT TTCAAAAACA GACACATCAA GAGGGACTCA CTTTTGATAA AGGGGTATTT GAGGAACTCT TAGTCAAGTC AAGTTTTGAT TTTTCAGATA TTCAAAAGAA TCTGGCGTTT TTAAAAGGAT ATAAAACTGA AGGGAATATC TCATCGCAAG ACATTACGGA GGCTATTCCT AAAAGTTTAC AAGATAACAT TTTTGATATG ACTCAACTTC TTTTGAGAGG ACAGATTCAA GATGTTCGTG AATTGGTTCA TGATTTACGA TTGCAAGGAG AAGATGAGAT TAAGTTGATT GCTGTTATGC TGGGACAATT CCGCACCTAT CTGCAAGTCA AATTGTTATC TGCTCAAGGT AAAAGCGAGC AACAAATTGT TTCAAGTCTT TCAGACTATC TAAGTCGGAA AGTTAATCCA TTTCAGGTTC GCTATGCTAT AAGAGATAGT CGTCATTTAT CAGTTGCATT TTTAAAGACA ACGATTAAGA CTCTGGTTGA GACAGACTAC CAGATAAAAA CAGGAACTTT AGATAAAGAT TATCTACTTG ATTTAGCACT TTTAAAAATA GCGTCAAACA GCTAA
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Protein sequence | MIAMETIEKL SREKLPKITV LAGEDLGQYS QAKEKFLKQI GFDSSDLTYS YFDMSETDYQ DAELDLESMP FFADEKVVIF DHFADMTTAK KSYLDEKALK RLENYLQSPV ETTRLVLMAS GKLDGKRRLV KLLKRDALVL EANSLKDTEL RTYFQKQTHQ EGLTFDKGVF EELLVKSSFD FSDIQKNLAF LKGYKTEGNI SSQDITEAIP KSLQDNIFDM TQLLLRGQIQ DVRELVHDLR LQGEDEIKLI AVMLGQFRTY LQVKLLSAQG KSEQQIVSSL SDYLSRKVNP FQVRYAIRDS RHLSVAFLKT TIKTLVETDY QIKTGTLDKD YLLDLALLKI ASNS
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