Gene STER_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0710 
Symbol 
ID4437392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp646777 
End bp647688 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content37% 
IMG OID639676408 
Producthypothetical protein 
Protein accessionYP_820162 
Protein GI116627543 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03639] CRISPR-associated endonuclease Cas1, NMENI subtype 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0265881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTGGA GAGTTGTACA TGTCAGTCAA AGCGAGAAGA TGCGCTTAAA GCTTGATAAC 
TTATTAGTGC AAAAGATGGG ACAAGAGTTT ACGGTGCCAC TAAGTGATAT TTCGATAATC
GTTGCAGAAG GTGGGGATAC AGTTGTTACC CTTCGTCTAT TAAGTGCCTT AAGTAAATAT
AATATTGCTT TAGTTGTTTG TGATAATGAA CATTTACCAA CAGGGATTTA TCACTCACAA
AATGGGCACT TTAGAGCGTA CAAGCGCTTG AAAGAACAGC TGGATTGGTC TCAGAAACAA
AAGGACAAGG CATGGCAGAT TGTAACTTAT TATAAAATCA ATAACCAAGA GGATGTCCTA
GCCATGTTTG AAAAAAGTCT GGACAACATT AGATTACTTT CAGACTATAA AGAGCAGATA
GAACCTGGTG ATAGAACGAA TAGAGAGGGA CATGCTGCCA AGGTCTACTT TAATGAGCTC
TTTGGTAAAC AATTTGTCAG AGTAACTCAG AAAGAAGCTG ATGTCATCAA TGCTGGTTTA
AACTATGGCT ATGCTATCAT GAGGGCTCAG ATGGCTAGAA TAGTGGCGGG TTATGGTTTA
AATGGCCTAT TAGGAATCTT CCATAAAAAT GAATACAATC AGTTTAATTT GGTTGACGAC
TTGATGGAGC CATTTAGACA GATTGTAGAT GTTTGGGTAT ATGATAATCT ACGAGATCAG
GAATTCCTTA AGTATGAGTA TAGGTTGGGA TTGACAGATT TACTCAATGC TAAAATCAAA
TATGGCAAAG AGACCTGTTC AGTGACAGTT GCTATGGACA AATATGTCAA AGGCTTTATC
AAATATATTT CGGAAAAAGA TAGCAGTAAA TTCCACTGCC CAGTGGTATC AAGTTTAGAG
TGGAGAAAAT AA
 
Protein sequence
MTWRVVHVSQ SEKMRLKLDN LLVQKMGQEF TVPLSDISII VAEGGDTVVT LRLLSALSKY 
NIALVVCDNE HLPTGIYHSQ NGHFRAYKRL KEQLDWSQKQ KDKAWQIVTY YKINNQEDVL
AMFEKSLDNI RLLSDYKEQI EPGDRTNREG HAAKVYFNEL FGKQFVRVTQ KEADVINAGL
NYGYAIMRAQ MARIVAGYGL NGLLGIFHKN EYNQFNLVDD LMEPFRQIVD VWVYDNLRDQ
EFLKYEYRLG LTDLLNAKIK YGKETCSVTV AMDKYVKGFI KYISEKDSSK FHCPVVSSLE
WRK