Gene STER_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0288 
Symbol 
ID4438355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp250233 
End bp252209 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content38% 
IMG OID639676026 
Productaminodeoxychorismate lyase 
Protein accessionYP_819793 
Protein GI116627174 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGGACA AGCATAATGA ATACTCGGAA TCTGCTGAAG ATAGCCTAAG CTTTAAAAAT 
CAGATTCTTC GAGATTTACA AGAAGCGACA CGGCTCCGTT CTCTTCGTGA GGAGGAGCAT
AAAAAAAGTG CAGCTGTTCC CGAGACACCA CTTTCAATGT CAGCTGATAG CCATGCAATA
GATTCTGGAT CAGCGTCAAA TAAAGTAAGT AACCAAAATT TGAGTTCTCA TTCTGTTGCT
CATAGTGCTA TAGCTAAAAC TATGACTTCT GAGACGGTTC GAGATTTTCA ATATAGTGTT
GACTTGTCTT CTAATTCTCA AGCTGATTCT TCAGCTCCTG ATGTCCATTC AAACGTAATA
TCAAGTCCTA AAGAGCAAGT TGATAAGGAG AAAAATTTAA GTATTCCTCA GGAGACTGAA
ATATTGAAAC GTCGTTTTAA ACGTCCAGTT TGGGAAACTA GTCTTAACGC GGAATCAGAG
GAAAAATATA TTCCTGCAGA TGTTGCTAAG GAGCTTATTG AAGCTAAGGC TAAAGAAGCT
ATCTACACGA ATCCTAAAGA ATTGGTGTCC AAGATGACAT CAGAACGTCA AAAAGAAGCA
TTTTTGCGGG AACATCATAC AGTAAGTAAT CACTCTGAAC CAGTAAGAGT TCAGTCAGAT
CTAGTAACTG ATGGCAATGA GGGTGATGAG AGTATTGCTT TAGCAGCAGC CTCTGAAAAA
TCTAACAAAA AGAAACGTAA GAAAGTGAAG AAGAAAAAGT CTTCGCCAAA AGATGTTAAA
CAGGACGGAA TCATCAACGA AGAACCGATT TCACGCTCCA ACCGAAATCA AAAACTCAAT
AAAAATAATC GTCGTGCAGG ACGAGTTGCA AGAAACATCA TTGTCTTCTT GATTCTTATC
TTATCATTAG CTGGATTCTT TGGTTATCGA TATGTTAGTG ATGCAGTTGG TGCAAAAGAT
GTCAAGTCGA CTAAGTTTAT TAGTGTTGAA ATTCCTGAAA ATTCAGGTAG CAGTTACATC
GGTCAGTTGT TGGAATCAGC TGGTGTCATT AAATCTGGTA AAGTCTTTAA TTACTATACC
AAGTTTAAGA ACATTTCAAA TCTAAAAAGT GGTTACTATA ACCTTCAGCC TAGTATGACT
ATGGATGAAA TTATTGAGGC ACTTCAGAAA AAAGGAAGTG ATAAGCCTCA GGAACCATCT
CTGGGTACAG TCTTGGTTAA AGAAGGATAC ACCATTGAGA AAATCGCCAA GGCGGTTGAA
GTTAATTCAT CAGCTAAAAA AGGTAAACAT TCATCTACTG GACTTAAGGA AAAAGACTTC
TTGAAACTTA TGAAGGATGA TGCTTTCATT ACTAAGATGA AAGCGAAGTA CCCAACCTTG
TTGGCAAACC TTCCGAATTC TACAGATGCT AAGTATGTCC TAGAGGGGTA TCTGTTTCCA
GCGACTTATA ATATTCATGA CGATACGACG GTGGAATCTT TGGCAGAGGA AATGCTATCT
ACGATGGACA CCCACCTATC ACCATACTAT GCAACAATTT CATCAAGTAA CCACAACGTT
AATGAAATCT TGACTCTAGC TTCTCTTGTT GAAAAAGAGG GAGCAACTGA TGATGACCGT
AAAAACATTG CTAGCGTTTT CTATAATCGT CTTAATTCAG ACATGGCCCT GCAAAGTAAT
ATCGCGGTTC TTTATGCTCT TGGAAAACTT GGTCAAGAAA CGACCTTGAA AGAAGATGCA
ACGATTGATA CGAATATTGA CTCCCCTTAT AATGATTATG TTCATAAAGG GTTGATGCCT
GGTCCTGTAG ATAGTCCTAG TCTGTCGGCA ATAGAAGCGG TTATCAATCC ATCTTCTACC
AAGTACATGT ACTTTGTTGC GGATGTATCA ACTGGTAATG TCTATTTTGC TGAGAGCTAT
GAAGAGCACC AGCATAATGT TGAATCTTAT ATTAATAGCA AACTAAAAGA TAAATAG
 
Protein sequence
MTDKHNEYSE SAEDSLSFKN QILRDLQEAT RLRSLREEEH KKSAAVPETP LSMSADSHAI 
DSGSASNKVS NQNLSSHSVA HSAIAKTMTS ETVRDFQYSV DLSSNSQADS SAPDVHSNVI
SSPKEQVDKE KNLSIPQETE ILKRRFKRPV WETSLNAESE EKYIPADVAK ELIEAKAKEA
IYTNPKELVS KMTSERQKEA FLREHHTVSN HSEPVRVQSD LVTDGNEGDE SIALAAASEK
SNKKKRKKVK KKKSSPKDVK QDGIINEEPI SRSNRNQKLN KNNRRAGRVA RNIIVFLILI
LSLAGFFGYR YVSDAVGAKD VKSTKFISVE IPENSGSSYI GQLLESAGVI KSGKVFNYYT
KFKNISNLKS GYYNLQPSMT MDEIIEALQK KGSDKPQEPS LGTVLVKEGY TIEKIAKAVE
VNSSAKKGKH SSTGLKEKDF LKLMKDDAFI TKMKAKYPTL LANLPNSTDA KYVLEGYLFP
ATYNIHDDTT VESLAEEMLS TMDTHLSPYY ATISSSNHNV NEILTLASLV EKEGATDDDR
KNIASVFYNR LNSDMALQSN IAVLYALGKL GQETTLKEDA TIDTNIDSPY NDYVHKGLMP
GPVDSPSLSA IEAVINPSST KYMYFVADVS TGNVYFAESY EEHQHNVESY INSKLKDK