Gene SO_A0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0078 
Symbol 
ID1172501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp61181 
End bp61423 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content43% 
IMG OID637346535 
Producthypothetical protein 
Protein accessionNP_720412 
Protein GI24376304 
COG category[K] Transcription 
COG ID[COG3609] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain 
TIGRFAM ID[TIGR02606] putative addiction module antidote protein, CC2985 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGGA CTACCAGTGT TACTATCGGA TCACAGTTAG ATGAATTTGT CGGTCAGCTT 
ATTTCGTCAG GTCGCTACGG CTCGACAAGC GAAGTTGTGC GTTCTGCCTT ACGACTATTA
GAAAGACAAG AAAACCAGAC CATAGCTTTG AAAATGGCGA TTGAAGCTGG TGAGCAAAGT
GGTGAATGTG CATTATCACT TCATGACATC GCTGCAATGG TGAAACAAAA GCACAATGTA
TAA
 
Protein sequence
MSRTTSVTIG SQLDEFVGQL ISSGRYGSTS EVVRSALRLL ERQENQTIAL KMAIEAGEQS 
GECALSLHDI AAMVKQKHNV