Gene SO_A0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0077 
Symbol 
ID1172500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand- 
Start bp60346 
End bp60981 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID637346534 
Productresolvase family site-specific recombinase 
Protein accessionNP_720411 
Protein GI24376303 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.349046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATTT TTGGCTATCT TAGAGCGTCA ACAAGCGACC AAAATGCAAA ACGGGCGCAG 
AGTACCTTAC AGAAGTTTGT ACAAGATAGG GGATTTCGTA TAGCTGGATG GTACATCGAA 
AATGAATCAG GAGCTTCGCT GCAACGACCT GAACTTCTTC GTTTACTTGA TGATGCTGCG 
AAAGGTGATG CAATCATCAT TGAACAGATA GACAGGCTTT CTCGTCTGGA TGAGAAAAGC 
TGGTTCACAT TAAAAGAAAT GCTGCACGGG AAAGAACTCA AAGTGATTAG CCTGGACTTG 
CCAACCAGTC ATATTGCACT CTCTCCCCAA ATCACCGATG AATTTACTGG ATCGATGATC 
AAAGCGATAA ATAGCATGAT GATGGATATG CTAGCTGCTA TCGCGAGAAA AGATTATCAA 
GATCGCCGCC GCCGTCAGGC TGAAGGAATA AAGAAAGCCA AAGAGGGAGG GAAATACAGA 
GGACGGCAAG CAGACTCAGA TCTACACGAA AAAATCTATC AACTACGAGT TGTCAACAAG 
CTGAGTATTA GCGATACCGC CAAACTCACC AATGTGTCGG ATAGAACGGT AATTCGGGTT 
GCTAAGAAGT TGGCATGTGA CCGTTCAACG GGGTAA
 
Protein sequence
MYIFGYLRAS TSDQNAKRAQ STLQKFVQDR GFRIAGWYIE NESGASLQRP ELLRLLDDAA 
KGDAIIIEQI DRLSRLDEKS WFTLKEMLHG KELKVISLDL PTSHIALSPQ ITDEFTGSMI 
KAINSMMMDM LAAIARKDYQ DRRRRQAEGI KKAKEGGKYR GRQADSDLHE KIYQLRVVNK 
LSISDTAKLT NVSDRTVIRV AKKLACDRST G