Gene SO_4710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4710 
Symbol 
ID1172289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4912342 
End bp4913034 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content45% 
IMG OID637346414 
Producthypothetical protein 
Protein accessionNP_720226 
Protein GI24376182 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACTTGC GACGTTTAAG GCCTTACACT GAGCTAACGT TTATATTGGG CTCAGTTATG 
AATAATGTAC GGAAATCAAT CTTACCCATT CTCGTCATTC TGCTGTCTTT AGCACTATTG 
ATCCCTGGTG TGACGCAACC TATTTTGAGC ATTAGCGGCA GCATAGATAA GGCCAAACTT 
ACCGAGCAAG GCATCGAACA AGTAGCGCGA AGTTTTGATG AGGATTTAGG GCGCGGCAGT 
GCCCGTGGCA TGTTAAATAT GGTCAGTGGT CTACTGGGGC TGCATACCCT CAAAGGTGAG 
GTGCAAGTAT TACAGCAGAC CCGCAGTATT TGGAGCACAG TCACTGAATT ATATAATACA 
GGCAATGGCT TAGTCGCAGG GCTGGTGATG CTATTTAGTA TTATTATCCC CGCCATTAAA 
CTTAGCCTAA TGTTGGCACA ACAAAGCGTA AGTTCAATTG CGCTACAATG GCGAATTCAT 
CATATTGTCG ATTTGCTTGC TAAGTGGTCT ATGGCCGATG TGTTTGTGGT GGCCTTGATC 
ATTACCTTTT TGGCGGGCAA TGCTTCGGGC GGTATGGGGG AAATGCTCAA GACACAGGCA 
CAATTTGAGA GCGGATTCTA TTTCTTTACC GCTTACTGCA TTCTATCCAT TGTAAGTGGT 
TACTTAGTGC GTCGACCCAC ACCTATTCTG TAG
 
Protein sequence
MHLRRLRPYT ELTFILGSVM NNVRKSILPI LVILLSLALL IPGVTQPILS ISGSIDKAKL 
TEQGIEQVAR SFDEDLGRGS ARGMLNMVSG LLGLHTLKGE VQVLQQTRSI WSTVTELYNT 
GNGLVAGLVM LFSIIIPAIK LSLMLAQQSV SSIALQWRIH HIVDLLAKWS MADVFVVALI 
ITFLAGNASG GMGEMLKTQA QFESGFYFFT AYCILSIVSG YLVRRPTPIL