Gene SO_4575 details

Gene Information

• Locus tag: SO_4575
• Symbol: menC
• ID: 1172160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4769562
• End bp: 4770686
• Gene Length: 1125 bp
• Protein Length: 374 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637346286
• Product: O-succinylbenzoate synthase
• Protein accession: NP_720091
• Protein GI: 24376048
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1441] O-succinylbenzoate synthase
• TIGRFAM ID: [TIGR01927] o-succinylbenzoic acid (OSB) synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTTAA CTTCACTTAG CTTGTATTTA TATCGCCTGC CCTTAGACAG CTTTTTGCCT 
GTGGGCAAAC AACGCATTGA CCATAGAAAA GGCTTAGTGC TGCAAGCCAA GGCCACTGCT 
GACGGTGAAG TTTGCGACAC CGAAATATCC AATGCTGAAG TGACTGACAG TGAAGTCACT 
GAGGGTGAAG TGAAGGAGTC CCATGTTGAA ATCGCGCCAC TCTCAGGGTT CGATATCGAC 
CAACAGCCAT TATCCGGCTT TAGCCGCGAA AGCCTCGATG AAGTACAGCA AGCCTTAACA 
GTGTTATTAC CCAAGCTGCA AAACCAATCT ATTGATTGCT TGCTCGAGCA GGCCGAAGCG 
AGTCCCTATC CATCCATTGC CTTTGGCTTA AGCCTATTGC ATGCCAAACT CAGCGGAAAA 
CTCGATGCGG TGCGCCCACT CACCACCGCT GTACCTTTAA TTTATCAACC AACTGATGCG 
CCTAAAGCTG AATTAATAGC AAAAATTGCC AGCCTCAAAC CTAGTGTGCG CTCAGTTAAA 
GTGAAGGTTG CACAAACCTC CATGGAAGAT GAGTTGAGTT TGATTTATGG CATCTTAAGC 
CAAAGGCCCG ATCTCAAGCT GCGCTTAGAT GCCAATTGCG GATTTAGTCT AGAACAGGCC 
CTCGACTTTG CCGCCTGCTT GCCACTAGAT AGCATTGAAT ACATTGAAGA ACCTTGCCAA 
CATCCGCAGG ATAATCACAC TCTGTATCGC GCCATTCCAC TGCCCTACGC CTTAGATGAA 
TCCCTCAATG ATCCCGATTA TCAATTTGTG ATGCATGAGG GACTCACGGC GCTCATCATC 
AAACCCATGC TACTGGGCAG TATCGAAAAA CTTCAGCGCC TTATCGATGA AGCCCACAAC 
CATGGCGTGC GCTGTATCTT AAGTTCCAGC CTTGAAAGCA GTTTAGGCAT CAATGATTTG 
GCCCATTTAG CCGCCATACT AACGCCCGAT GAAATCCCCG GGCTTGATAC CTTAACGGCC 
TTTAGTCAAG ACTTATTAGT CCCATCGGGC AAACTACAAT GTCTTACGCT TCAATGCCTG 
ACACTGAATC AACTCGAACG AGTCGCCAGC ACTGTACAGG ATTGA 

 

Protein sequence

MILTSLSLYL YRLPLDSFLP VGKQRIDHRK GLVLQAKATA DGEVCDTEIS NAEVTDSEVT 
EGEVKESHVE IAPLSGFDID QQPLSGFSRE SLDEVQQALT VLLPKLQNQS IDCLLEQAEA 
SPYPSIAFGL SLLHAKLSGK LDAVRPLTTA VPLIYQPTDA PKAELIAKIA SLKPSVRSVK 
VKVAQTSMED ELSLIYGILS QRPDLKLRLD ANCGFSLEQA LDFAACLPLD SIEYIEEPCQ 
HPQDNHTLYR AIPLPYALDE SLNDPDYQFV MHEGLTALII KPMLLGSIEK LQRLIDEAHN 
HGVRCILSSS LESSLGINDL AHLAAILTPD EIPGLDTLTA FSQDLLVPSG KLQCLTLQCL 
TLNQLERVAS TVQD