Gene SO_4525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4525 
Symbol 
ID1172115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4720294 
End bp4721163 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content53% 
IMG OID637346243 
Producthypothetical protein 
Protein accessionNP_720045 
Protein GI24376002 
COG category[R] General function prediction only 
COG ID[COG4667] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAC ACTTAGACTT AAACTTACTG CCGGTACTAG AAATTCTCCT CGAGGAGCAG 
AGCGTCACGG CCGCGGCGGC GCGACTGCAT TTAAGTCAGT CGGCGGTGAG CAAGCAATTG
ACTCGCCTGC GGGAAGTGTT TGATGACCCC TTATTCGAGC GTACCGCTTA CGGGCTAAAG
CCGACGCCCA AGGCGCTGTC GCTGGCGCCC GACTTACGCC AATGCTTACA GCAATTGGCG
CAATTTACTC GGCCCGATAG TTTTGAGCCC GCCTTAAGCC AAAGGCAATT TCGAATGCAT
TTGGTCGAAA CCACCTATTC GCTGACCTTT CCGTATTTTA TGCCCTCATT GCTCGTCCAA
GCGCCCTGGG TGAGTCTCAA TTGCCAAACC TGGCGGCTCG ATACCATGGA CAGACTCCTG
CGCTGCGATA TCGACTTGGC TATTGGCTGC CGCGAATGGG ATGAACGCTC ACCCATGCAT
GTTAACCATA TTCCGGACGA TCTCCACTAT GTTGAATTAG TGCAGGATTA TACGGTTTGC
CTGATGCGCC GCGACCATCC TGCATTAGCG CAGGAATGGG ATCTCGACAC CTTTTTAAGT
TATCGCCAGT TGCAGGTAGC CTTTGGCGGT TTAGAGCATT GGTTGTTAGA TGATGTGCTG
CAAATTGCAA GGGCGGAAAC GGGATATTGC GGTGAATATG ACCGACTTCC AGAGTGCGCT
GGCCCTGTGT GA
 
Protein sequence
MQNVALVLEG GGLRAIYTAG VLDAFLQQQL YFPYVIGVSA GAIYPASYVS RQFGRNLTIQ 
QQYLQDKRYM GLRHWLATVN YVNTDFTYKR MAYELLPFDF KTFLSSGTEF KVGAFDCNTG
QTDYFGMADF QDHDKLLDVL IASSSLPFIA NPYRINHQTY LDGGIADPIP MAQAQQDGYK
RQVVILTQDA NYRKSPMKFN WLARKRYQTY PTVAAALKVR HQRYNHSLDE LAQSVASGNT
FVIRPAAPLN LSRLDRNIDK VTAVYHQGLA DGQAILPKLQ AWLSTNVRQ