Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4476 |
Symbol | |
ID | 1172071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4664291 |
End bp | 4664782 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637346192 |
Product | spheroplast protein y precursor, putative |
Protein accession | NP_719997 |
Protein GI | 24375954 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAA CATTATCTCC TTTAAAAGCT AGCTTGTTTG CCATCTTAGC AAGCTCGACG GTATTGGTGA CGACAGTGAG CGCTGAGCCT AGCCAAGAGT GCGATCATCC TCGCAGTGAG TTTCATAAAC GTGGCGATCG CATGGGCCAT GACGGCATGC ACAAAATGTT TGAAGGCTTG GAATTAACCG ATACACAAAA GGCAGACATT AAAAAACTGT TTGCCGAGCA ACGTGCTGCA CGTAGCGACG ATAAGCCCAC CAAGGAGGAG CGTTTAGCAC GCCGTGCAGA AATGCATGCG TTGATCACCG CAGCTACATT CGATGAGACA CAAGCTAAGG CATTGATCGG TGCCCAGCAG GAAAAACGTC AAGCGCAAGC CATTGAAAGA ATGAAGATGC AGAATCAAAT TTACAACCTG CTGACGCCAG AGCAACAAGC TAAGTTTAAA GCGCGATTTG AAGCACACAC TGGTAAAGAA CCTCGCAGTT AA
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Protein sequence | MMKTLSPLKA SLFAILASST VLVTTVSAEP SQECDHPRSE FHKRGDRMGH DGMHKMFEGL ELTDTQKADI KKLFAEQRAA RSDDKPTKEE RLARRAEMHA LITAATFDET QAKALIGAQQ EKRQAQAIER MKMQNQIYNL LTPEQQAKFK ARFEAHTGKE PRS
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