Gene SO_4381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4381 
Symbol 
ID1171983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4576653 
End bp4577195 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content51% 
IMG OID637346107 
Productthioester dehydrase family protein 
Protein accessionNP_719905 
Protein GI24375862 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGTT CTACTGACAC TGCAATGGCA GCCGCCGAGC CGATTTGGCT GCAACACTTA 
GCCGAGCAGA ATATTGCCGA TTTTATTCCG CATCGTGCGC CAATGATCTT GATTGATAAG 
ATTATTAGCC ATCAGCAGGA TGCGCTCGAA ACCGAAGTGC TGATCACTCC GCAGAGCGCT 
TATTTTGACG AGCATCGTCA AGCCGTCCCC AATTATGTGG GCATCGAATA TATGGCGCAG 
AGCATTGCCG CTTTAGCGGG CGTTGAGGCT AAACTGCGTC ACGATAAAAT CCGCGTGGGA 
TTTTTATTGG GATCGCGTAA ATTAGCCTTA CACACGGCGC AGTACGAACT CAACCGTCGT 
TACCGCACTC AGGTTAAACG CCTCTATCAA GAAGAGTCGG GACTGGCGGT ATTCGATTGC 
CAGATTTATC TATTGCCAGA GGCGCAAGCA CAGCAAACAC CACTGTTAGT CGCCGAGGCG 
AATGTGAATG TGTTCCAGCC ACAGGACACC CAAGCGTATA TCGCCTCAAG CCAGCAGGCT 
TAA
 
Protein sequence
MSSSTDTAMA AAEPIWLQHL AEQNIADFIP HRAPMILIDK IISHQQDALE TEVLITPQSA 
YFDEHRQAVP NYVGIEYMAQ SIAALAGVEA KLRHDKIRVG FLLGSRKLAL HTAQYELNRR 
YRTQVKRLYQ EESGLAVFDC QIYLLPEAQA QQTPLLVAEA NVNVFQPQDT QAYIASSQQA