Gene SO_4337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4337 
Symbol 
ID1171942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4528777 
End bp4529277 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content47% 
IMG OID637346066 
ProductAsnC family transcriptional regulator 
Protein accessionNP_719861 
Protein GI24375818 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA CTCACCCATA TAAACTCGAC CAACTCGATT TAACCATTTT GCGTTTACTG 
CAAACCCACG GCAGGTTATC GAATCTTGAA CTAGCAACGA AAGTCGGCCT GTCACCTTCC 
CCTTGCTCTC GCCGCGTTAA AGCGCTAGAA GAAGCGGGTT ATATTGCTGA TTATGCGACG 
CGTCTGTCAG CGGATAAATT CAACCTGCAT TTGACTGCGT ATATCCATGT ACGGATGGAA 
AAACACACGC CAGCGATCCT CAACCAATTT GAAACCAATG TATTGGCGTA CGAAGAGGTC 
CAAGAATGCG CGCTGATCAC CGGTTCTGAA GCCGACTACC AACTCAAAGT GCTAGTACAA 
GATATGGCGC ACTTTCGCAC CTTCCTGTTA GATAAACTCA CCACCAATGT GCATATCGCA 
GGTGTACATT CCAGCTTCGT GTTGAAAAAG GTCAAGGACC ACACGGCCAT CCCCTTAAGC 
CATATCACCA TTGAACCCTA A
 
Protein sequence
MTETHPYKLD QLDLTILRLL QTHGRLSNLE LATKVGLSPS PCSRRVKALE EAGYIADYAT 
RLSADKFNLH LTAYIHVRME KHTPAILNQF ETNVLAYEEV QECALITGSE ADYQLKVLVQ 
DMAHFRTFLL DKLTTNVHIA GVHSSFVLKK VKDHTAIPLS HITIEP