Gene SO_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4299 
Symbolcat 
ID1171904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4477614 
End bp4478246 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content43% 
IMG OID637346025 
Productchloramphenicol acetyltransferase 
Protein accessionNP_719824 
Protein GI24375781 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT ATTTTGAGAC CCCGTTTAAA GGGAAGCCTC TCAGCGAACA GGTCAAGAAT 
CCCAATATTA AGGTTGGCCG TTATAGTTAC TATTCAGGCT ATTATCACGG CCACTCATTT 
GATGATTGTG CTCGCTATCT TTTGCCAGAT CGTGATGACG TTGATAAATT GATTATTGGT 
AGTTTTTGCT CGATAGGCTC TGGTGCTTCT TTTATTATGG CTGGCAATCA AGGACATAGG 
CATGATTGGG TGACATCATT CCCTTTTTTC TACATGAATG AGGAGCCTGC ATTTTCAGAA 
GCTGTTGATA CATTTCAAAC CACTGGCGAT ACCGTGATTG GAAATGATGT GTGGATTGGT 
TCAGAAGCGA TGATTTTGCC TGGCGTCAAG GTTGGCCACG GCGCGGTGAT AGGGAGTCGC 
GCCTTGGTGA CAAAAGATGT AGAGCCTTAC ACTATTGTTG GCGGAAATCC AGCAAAACCA 
ATAAAGAAGC GGTTTTCAGA ACAGGAAATT TCAATGTTGT TGGAAATGGC GTGGTGGGAC 
TGGCCATTAG AGCAAATTGA ACAAGCTATG CCTCTTTTGT GTTCATCTGA TATAGCAGGC 
CTTTACCGCA TCTGGCAAAG TTCAAACGCT TAA
 
Protein sequence
MKNYFETPFK GKPLSEQVKN PNIKVGRYSY YSGYYHGHSF DDCARYLLPD RDDVDKLIIG 
SFCSIGSGAS FIMAGNQGHR HDWVTSFPFF YMNEEPAFSE AVDTFQTTGD TVIGNDVWIG 
SEAMILPGVK VGHGAVIGSR ALVTKDVEPY TIVGGNPAKP IKKRFSEQEI SMLLEMAWWD 
WPLEQIEQAM PLLCSSDIAG LYRIWQSSNA